Gene
| Gene Model ID | pfu_aug1.0_8765.1_24473 |
|---|---|
| Locus | scaffold8765.1 : 1570 ... 15365 : - |
| To GenomeBrowser | scaffold8765.1:1570..15365 |
| Genes list of scaffold | scaffold8765.1 |
| Synonym | pfu_aug2.0_1522.1_08419 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8765.1_24473.t1 | 1 | 1 | DUF4217 | 42 | 86 | 1.6e-12 | 46.7 | 2.2e-16 | 3.2e-12 | 45.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8765.1_24473.t1 | gi|307198143|gb|EFN79171.1| | Probable ATP-dependent RNA helicase DDX10 [Harpegnathos saltator] | 5.0e-35 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8765.1_24473.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8765.1_24473.t1 atgcaagtattttatacaaaatgcaggcactgtattttcgacacttttcttacgtgcacaacttatgagaaattatcacg tcaaactttgatatttctgtcgtccatattcattcaacggaaaaagaatcgggcatttattggatatttacgctctgtgt tcctgatgagcaacaagaaagtgtttgatgtccataaactagacactgataaatatgcagggtctctggggcttgccatt ccacctagagtgaggtttttgaaaagagaagagaaaaggatagctgagaggaacgaaataaaaaagtcaaaagtgaaaaa cgataaaaagttagaatcagtagaccaaagtgatgatttagaaagaaaactagacaatttaaagagcagactggctcctg ggagtgatgatgacagtgaagacaacagtaatgatgatgaaagtgaaagtgaaaatgatagagaagagggtcaaagtgaa agtgaaaatagtgatgaaagtgaaaatagtgataatgaagatattgatcaggtgtatagggaaagtggcaataagaaagg tcaagctcttgactttgatatcgaggacaatgtggaagatttatttacagttaagagaacagtcttaccgtccgactctg actccgatcaagaggaggtaactcttacagagactgctagttccttaaacggagataatcaaactctgaagaaaaaagga aaaaatcagaccaaggcagctgtagctaagaaacttttgaagaaaatggtgaaagtgaatacaaaggttgtctttgatga ggaaggagagatggtgagggatgtactgaagaagccccaggcagagctgagtgagggggaggagggagaggaggaggagg acagaggtattgatataggtaaagccaaactacgcatgaagaaggaagatcagatagataaacagctgtatagggagaaa attaaacagagacataaggaagaaagaattaaaaagaaggaaaaacttcgagctcagaaaagaaaagcagagcctgaagt agatgatgatgaggaggtagaggctgtgttagatgtcagaggagatgaggaggatgatgatcccctgagttatatacctg acccagataaggtgtatggtcccgaggacagtgatacagaacaggggtatagggaaatagccaatagtagtgatgaggag gaatacagcccacaattaaaaagaaggaaattgaaggacatgtcaccttccaatagtgataatgaagacgatgatatctc agatgacaatgctagtgttagtgatggtgatagtgatgaagaagatgatgattctagcaatgaagatgatagtgacaatg atgatgatgatgacatggacacagaacatggtctggaagttgatgaagcaatagccatgaaattattaacaggaagaact tga |
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Protein
| Protein ID | pfu_aug1.0_8765.1_24473.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8765.1_24473.t1 MQVFYTKCRHCIFDTFLTCTTYEKLSRQTLIFLSSIFIQRKKNRAFIGYLRSVFLMSNKKVFDVHKLDTDKYAGSLGLAI PPRVRFLKREEKRIAERNEIKKSKVKNDKKLESVDQSDDLERKLDNLKSRLAPGSDDDSEDNSNDDESESENDREEGQSE SENSDESENSDNEDIDQVYRESGNKKGQALDFDIEDNVEDLFTVKRTVLPSDSDSDQEEVTLTETASSLNGDNQTLKKKG KNQTKAAVAKKLLKKMVKVNTKVVFDEEGEMVRDVLKKPQAELSEGEEGEEEEDRGIDIGKAKLRMKKEDQIDKQLYREK IKQRHKEERIKKKEKLRAQKRKAEPEVDDDEEVEAVLDVRGDEEDDDPLSYIPDPDKVYGPEDSDTEQGYREIANSSDEE EYSPQLKRRKLKDMSPSNSDNEDDDISDDNASVSDGDSDEEDDDSSNEDDSDNDDDDDMDTEHGLEVDEAIAMKLLTGRT |
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