Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_8767.1_60497
Locus scaffold8767.1 : 11326 ... 29462 : +
To GenomeBrowser scaffold8767.1:11326..29462
Genes list of scaffold scaffold8767.1
Synonym pfu_aug2.0_320.1_00600

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 7
8-16cell 1
>Adult tissues
maleGonad 2
mantle 3
mantleEdge 1
pearlSac 3

Transcript
Transcript IDpfu_aug1.0_8767.1_60497.t1
Definition-
>pfu_aug1.0_8767.1_60497.t1
atgaccgcgaaagtagggaaggttaatacacagcgaatgattctatgtatacagtacatgtgtcttggatatgttaactc
tctgggaaccaattatgcttcaaaatatcatgaaaactttggagttgctaagaaattgaggattggagtctatcaaatct
caatgtcaaagggagtcctctttgatgacaaagggatgaagatagattccatccatgtgagaccacaggaccttactcca
ggggaacaactagagagtgatagacattatataatgatagaggaggagaaggctattagtagcactggaatgggggaggg
attcaatcctccaaggatggtacgacctgtagaaaatagctcagatggaactcctgatgtaagacctcaaagagaagcac
atgaagacctttctttactaaatcagactcattccttttcaagaaacgatcagagttcatttcatctcagattcaagcag
ctgcaaacaaatcaatcaaatacttttcaacaaaattcatcagaaactaaatcatcatttcatcccacagaatcaggcca
tgattttgagtcaacctcttcaaataattcatcggcatcaccattttcaaaatactataggaattcttctgccactctaa
attcagattcatctttcatgaagaatgatggcttgtcaagtcctcagcaaaagatcccctcaccatggagtacgtatgga
aggaatggtctgaataagaggaacagtcctgtgattggtaaagtatatgtgtcgaagaatgaagatgggactttctcatc
tgaagatccattacaagaatcatctcttaatcttgctgtttttcgtggcactgtgactggaaagagtaattttgataaag
gattagctagtgaaaagaacgacgttgctaatgaatctgttgcgaaaagtgagacttctgctaaaaggaacgcagctcag
atcttggcacttatgggaaacagaaatgctgcagtagggactatgctagattctgtaagaccacagtcatttgaacaatg
tttgaagaaatctgataaaactatctataatgattcatcaaagtatcaagatagtttaaatgtaagttacaattgggtag
aaacaccaacaggaagtcaattcaggtcagaagaacagagtacaaattcagatggttttcagactttgcagtgtaagtac
cagaaagaatcttggacactgaataatgagactgagggaatagatggtagagcttgtactcaaaatgagaaccagaatct
ttcggatgcaagtttgccagcacaaaatgaatgccgttcttttgtagaaaataccaatggcactcatgtagatgatgaag
aaaatgaagatgaagatgaagatgaagatgaatcagaggaagatatggcaggtattgatacagcacaacccgacttccac
attagtttttcacctctttctcagttttcaaatgacttagaagacagtgaagataacgttatagagaagactgaaagtca
aaatgatgagtcaaattgcacagggacaatatcttccacactcaaattatgtaataatgatgctaactcagactccagaa
ttccagaaagtgaacaggatgttgaaatgaaaggctctccagaggacttgccagacagtactgagcagttacatgtagtg
gaatcaaaagtaaatgataaatgtgtgttgaacagaacagaaaattcagaaaatgattcatcactcaatgggaaagttgt
aatcgataagagtttatttgatgctggtggaagttcaacagataaatgtgaaatgaaaacattatcatcttgtgagaata
aagaaggagctcaagatgatacaaatgagccattggctcaagaagagcctaaaggtgaggatgctacaaaagaggaggag
gtgcaagttatgactgaagaagattgcagtgatcatactgaggagcaagcttttcagagacatgtagatagcaaggaagg
tgcaatggaggagccacaatttcaagaagatggcaaggtagatttttctgaggagcaaaattttcaagaagatggcatgg
tagatttttctgaggagcaaaattttcaagaaaatggcatggaaagtttaaccaaggagactcatcttgaagatgatgct
atggtttatgatgtaatcaatgaacaactgatttcagaagatgacatggaaaaaagtagtgcaaatgagcagctgattca
tggaattattagtgacaaaaacttactttgcaatccggccataccgtctttaggggtgttttatttaaaaattgaagaaa
catcaagctccaaagcctacatcggacatttcggtcctgctagaaatgaggcacatcaaaccgatgaaaaatttgtccag
ccagtccgacggtccaatgaatttggcggacactga

Protein
Protein IDpfu_aug1.0_8767.1_60497.t1
Definition-
>pfu_aug1.0_8767.1_60497.t1
MTAKVGKVNTQRMILCIQYMCLGYVNSLGTNYASKYHENFGVAKKLRIGVYQISMSKGVLFDDKGMKIDSIHVRPQDLTP
GEQLESDRHYIMIEEEKAISSTGMGEGFNPPRMVRPVENSSDGTPDVRPQREAHEDLSLLNQTHSFSRNDQSSFHLRFKQ
LQTNQSNTFQQNSSETKSSFHPTESGHDFESTSSNNSSASPFSKYYRNSSATLNSDSSFMKNDGLSSPQQKIPSPWSTYG
RNGLNKRNSPVIGKVYVSKNEDGTFSSEDPLQESSLNLAVFRGTVTGKSNFDKGLASEKNDVANESVAKSETSAKRNAAQ
ILALMGNRNAAVGTMLDSVRPQSFEQCLKKSDKTIYNDSSKYQDSLNVSYNWVETPTGSQFRSEEQSTNSDGFQTLQCKY
QKESWTLNNETEGIDGRACTQNENQNLSDASLPAQNECRSFVENTNGTHVDDEENEDEDEDEDESEEDMAGIDTAQPDFH
ISFSPLSQFSNDLEDSEDNVIEKTESQNDESNCTGTISSTLKLCNNDANSDSRIPESEQDVEMKGSPEDLPDSTEQLHVV
ESKVNDKCVLNRTENSENDSSLNGKVVIDKSLFDAGGSSTDKCEMKTLSSCENKEGAQDDTNEPLAQEEPKGEDATKEEE
VQVMTEEDCSDHTEEQAFQRHVDSKEGAMEEPQFQEDGKVDFSEEQNFQEDGMVDFSEEQNFQENGMESLTKETHLEDDA
MVYDVINEQLISEDDMEKSSANEQLIHGIISDKNLLCNPAIPSLGVFYLKIEETSSSKAYIGHFGPARNEAHQTDEKFVQ
PVRRSNEFGGH

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495