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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_8768.1_38819
Locus scaffold8768.1 : 12706 ... 18021 : +
To GenomeBrowser scaffold8768.1:12706..18021
Genes list of scaffold scaffold8768.1
Synonym pfu_aug2.0_835.1_17877

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_8768.1_38819.t1 1 1 Glyco_transf_10 67 361 0.0 202.6 0.0 0.0 202.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_8768.1_38819.t1 gi|321462014|gb|EFX73041.1| hypothetical protein DAPPUDRAFT_58354 [Daphnia pulex] 2.0e-35

Transcript
Transcript IDpfu_aug1.0_8768.1_38819.t1
Definition-
>pfu_aug1.0_8768.1_38819.t1
atgaacaatgttgacttaatcaagatattgtttgtcttcaccattatcttcgtatcattcatgttaaccatgtggttcaa
atctggaccgacctatgtgataccaattttaaaggagcacaaactaattcccggtccgttccggtatgaatgcaaagacg
gagcagctaatccaagaaatttacatactgatatcaaaaagatttgcacgggaacgggaagtatttggaaaaccataaat
tttgatacgtgttcggtaaaaggttgtatccttgaggataatctgaccaaatctcacgaatgccatgctgtaatgcttca
aaccaatcatttagaggacagattcatccctcgccaagatgaacaggtctggattcttgtatcacatgaaacaccattca
ctttgactccaattttaggcaataaaaaatggagaggggcttttaattggattttttcatatcagaaaaactccgatata
ttttttccatggggacgagtcattaagaagaaccaaatacaaaagaaaaattacagcgctatttttgactcaaagaacgg
aacagcagtatggttttctagcaactgtcaaacccaaagcaaacgggaagaatatgttaatataaagcaaagggtaatcg
aaatagacatctacggaaagtgtgggaatttatcatgcaaaaatattataaacctagtcgacccgaaagatgagtgccga
accgagaagagtatgcaatacaaattttacttatctttcgaaaacgcactctgccctgcatatatgacggagaaattgtt
cttgttttatcagtacgatcgtcaaataatcccagtggtcagaggagttcagaatgcagaggaaattctaccgaataaca
cttacgttgatgctagtaagttcgataacgcaacacaactagctcattacctgaaagagcttggaaacgacagggaaaga
tacatagccatgttagaggaaaaagataaatatacagtagaatcccttgctgatgttttcgaatccgctttgtgttctct
atgcgaaaaactccacaattcctttaatcaacgatgcatcgacactaagatatggatgaaacagagtttcgaagaatgca
gggagcctgatgatctcatgtga

Protein
Protein IDpfu_aug1.0_8768.1_38819.t1
Definition-
>pfu_aug1.0_8768.1_38819.t1
MNNVDLIKILFVFTIIFVSFMLTMWFKSGPTYVIPILKEHKLIPGPFRYECKDGAANPRNLHTDIKKICTGTGSIWKTIN
FDTCSVKGCILEDNLTKSHECHAVMLQTNHLEDRFIPRQDEQVWILVSHETPFTLTPILGNKKWRGAFNWIFSYQKNSDI
FFPWGRVIKKNQIQKKNYSAIFDSKNGTAVWFSSNCQTQSKREEYVNIKQRVIEIDIYGKCGNLSCKNIINLVDPKDECR
TEKSMQYKFYLSFENALCPAYMTEKLFLFYQYDRQIIPVVRGVQNAEEILPNNTYVDASKFDNATQLAHYLKELGNDRER
YIAMLEEKDKYTVESLADVFESALCSLCEKLHNSFNQRCIDTKIWMKQSFEECREPDDLM

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