Gene
| Gene Model ID | pfu_aug1.0_8789.1_60503 |
|---|---|
| Locus | scaffold8789.1 : 48336 ... 72728 : + |
| To GenomeBrowser | scaffold8789.1:48336..72728 |
| Genes list of scaffold | scaffold8789.1 |
| Synonym | pfu_aug2.0_231.1_03843 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8789.1_60503.t1 | 8 | 1 | CENP-F_leu_zip | 14 | 50 | 1.1e-13 | 51.2 | 0.019 | 26.0 | 4.6 |
| pfu_aug1.0_8789.1_60503.t1 | 3 | 1 | Filament | 22 | 273 | 1.0e-05 | 25.1 | 0.013 | 18.0 | 4.6 |
| pfu_aug1.0_8789.1_60503.t1 | 8 | 2 | CENP-F_leu_zip | 53 | 187 | 1.1e-13 | 51.2 | 2.7e-12 | 3.6e-09 | 36.5 |
| pfu_aug1.0_8789.1_60503.t1 | 8 | 3 | CENP-F_leu_zip | 184 | 317 | 1.1e-13 | 51.2 | 0.029 | 38.0 | 4.1 |
| pfu_aug1.0_8789.1_60503.t1 | 3 | 2 | Filament | 283 | 351 | 1.0e-05 | 25.1 | 0.0011 | 1.5 | 8.2 |
| pfu_aug1.0_8789.1_60503.t1 | 8 | 4 | CENP-F_leu_zip | 321 | 434 | 1.1e-13 | 51.2 | 3.7e-07 | 0.00049 | 19.9 |
| pfu_aug1.0_8789.1_60503.t1 | 3 | 3 | Filament | 328 | 604 | 1.0e-05 | 25.1 | 7.5e-09 | 1.0e-05 | 25.1 |
| pfu_aug1.0_8789.1_60503.t1 | 8 | 5 | CENP-F_leu_zip | 422 | 568 | 1.1e-13 | 51.2 | 1.3e-05 | 0.018 | 14.9 |
| pfu_aug1.0_8789.1_60503.t1 | 8 | 6 | CENP-F_leu_zip | 558 | 645 | 1.1e-13 | 51.2 | 0.00063 | 0.85 | 9.4 |
| pfu_aug1.0_8789.1_60503.t1 | 8 | 7 | CENP-F_leu_zip | 653 | 699 | 1.1e-13 | 51.2 | 0.13 | 170.0 | 2.0 |
| pfu_aug1.0_8789.1_60503.t1 | 8 | 8 | CENP-F_leu_zip | 908 | 966 | 1.1e-13 | 51.2 | 0.2 | 270.0 | 1.3 |
| pfu_aug1.0_8789.1_60503.t1 | 1 | 1 | GRIP | 964 | 1008 | 3.0e-17 | 61.8 | 3.1e-20 | 4.2e-17 | 61.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8789.1_60503.t1 | gi|115891709|ref|XP_794992.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_8789.1_60503.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8789.1_60503.t1 atgtcctgtaaagagcgtgtgaaggaaggggggaaggaggaggaagttgcaaatgtaacaaatcagcttcaagctgctaa taacaaaattgaaaatttggatgagactatagaaaagattacaatggaaactcaggagctgaaagaaaatgttgcaagtt tggaagagaaggtcaaggaaagacaatcctacactgaggagctggagaataggattctcgagatgtcaaacaacctggcg gaaacaaaaagcaaacatgaacagttcatcgcaaaattggaaacagacggtgaatctgcaaattctatgcttcaaacaga aattgaggaattgagaacaagtcgtaatgagcttgaggcagagttgagcaaaatgaaggaaatgaactcagaaattgatg cagctaaaaggttgttggaggagaaggtatcaacatttgaaaatgagcttaaatcaaaagaagatgttatttctcagatg gagagtgagaaaggaaaagtttcagaggaagcatcttcgaaatgttttcagttagagtcggaactgaaagaaatgtcaga aaaacatgcagaatcagtcaaaactgcaaaggagttgcagactttggttgaaactttagaagcagaatcaaatcaaaagg atgaaacgattgcatcagcagaaaaagagagaaatgacggggttcagcaaactcagggtatacaaagtgatatggagaaa ttagagcagatgtgtcagaatttgaagacggaatgtgagggtctaaaacaggagaaggaggaatcatcgtcacaacttac tgaacaaactgtgcaaattacggaactaagacagctgataggagaaaaggatgagaaagaaactgtgcttttaaaagaaa tggaggatttgaaaagtgcagttcagagctgtgaagatgaagtagaaaagacacggtgggaacttgaggagaaaaattat cagatagaagcgttgaaacaagaacttgattccaagcgtgaagatttacatcagtctggcagtgaaatggccaatgtgaa ggaggagactgatagagtacaaagagaggctgataagtgggaaaaacagtgtgaagaactgacggcaaaaatacaggaac tgtgtacggagaaagaggagctagcatcaaaatgtacaaatatggaaagtcagcttagtgctttgaaggaagaaaatgaa tctagtgtaaataatgtgatagaaaaacttcatgaggaattgcgtgaaaaagataaaagatgcaaaagtcaggaggaaaa gttacaaacaatgtcggaggaaaattctgatttttctaaacaggttgacagtttgtcttcagaaatatcagagttaaaga aagaattagaggatgtgaaggcattgcaagaagaacacagctccactcaagctaaactagctgctaaaacgaaagaggca gaggaaattcaggctgatctgaacagactcataacagagatggcgtctgtcaaagagagtgtggcaatggcgaatgaaga taaagaaaaataccgaaaagaaagtgaaaatattaaagcagaaattaagaagttagaaggtaccgtgtcagagatgaagt catcagtgaagaccagtgaacaggagaaagaagccaaccgaatacagagagaccaagtcatcaaagagaaaacacagctg cagacagaaatatccgaattgaaggacaagatgaagtcatcagaggacagacagaaggacgtagtgtcagcattacaaaa tcagatcaaagacatacagacacaactagaaaaggctaaacaggaggtagaacagaggacttctgatgcccagagacagg gtcaaatagaacatctcaatcaacaactggaagagtataagatgcaaatagcagaggtttcaggagagaaacagaagctt caagaaaaactccactccttctctgactctaatacaagaacagttaaatccttggagaatcgcgtacaggctctacagga tgaccttgacctgtcaaagagtgaactgatggctgtacaggccgagtatgaaggttataaggttcgagtacacagtgtat tgaaacagcaaaagaaaggttctcctgatgttgttaatgaaggagagaagatggaaagcgaaaagttgtcgtctgctgag caggataatgagatgcagatggaggagcacagtcgtctgctgacacggtacaataaactactacaggatgtacaagagag ggaaaatggacttaaacgaagtgatagacattttttaaggatcgaagaattgaccaatgagaagtcggtctacatgaaag agcaacaagagatgattaaacaactgaacaaacaaaatgagaacatttcatccactctgaaggaacaaatgcggacacta aaggaggatcaccaccgagcgttgggagtcctacaacgtcagttagacatgtccgataacgaggtcatgaggctccaaca ggaggtacgacagctacaacattccccaagacctgtcgtacgagagcagatcctaccagtgtcggcagccgtaaccgaat acgtacctgacataagacatgaagaaagacaggaaggggagggatcagagatcgtagatccagaacctctggtggtgggt catagtaaggcagtgggaccaatacccctggatcaactactaacaacaggggcagaggagagagtggtgagggaccaagg tttagagatggagacaatgagagagaatctagatacagccaataagagaatagagcatttaacagagctttctagtgaga acgaagccacagtaatgagattaaccgagcaagctaagatactgaaggaggagatccgacggttagagaggaatcaggaa cgggaaaaggaggcggctaatatggaataccttaaaaatatactccttaagtttctgagtcttaaagccggagatgaacg tcaacaattagtaccagtattaaccacaatgttaaaacttagtcctgatgagaaaggaaaaatagaagcagtagctcaag gtgatgctgtaggagaaaatcagcaggcacagcaaggagggtgggggtcttacttacatcggtggtcaggactgacgtaa |
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Protein
| Protein ID | pfu_aug1.0_8789.1_60503.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8789.1_60503.t1 MSCKERVKEGGKEEEVANVTNQLQAANNKIENLDETIEKITMETQELKENVASLEEKVKERQSYTEELENRILEMSNNLA ETKSKHEQFIAKLETDGESANSMLQTEIEELRTSRNELEAELSKMKEMNSEIDAAKRLLEEKVSTFENELKSKEDVISQM ESEKGKVSEEASSKCFQLESELKEMSEKHAESVKTAKELQTLVETLEAESNQKDETIASAEKERNDGVQQTQGIQSDMEK LEQMCQNLKTECEGLKQEKEESSSQLTEQTVQITELRQLIGEKDEKETVLLKEMEDLKSAVQSCEDEVEKTRWELEEKNY QIEALKQELDSKREDLHQSGSEMANVKEETDRVQREADKWEKQCEELTAKIQELCTEKEELASKCTNMESQLSALKEENE SSVNNVIEKLHEELREKDKRCKSQEEKLQTMSEENSDFSKQVDSLSSEISELKKELEDVKALQEEHSSTQAKLAAKTKEA EEIQADLNRLITEMASVKESVAMANEDKEKYRKESENIKAEIKKLEGTVSEMKSSVKTSEQEKEANRIQRDQVIKEKTQL QTEISELKDKMKSSEDRQKDVVSALQNQIKDIQTQLEKAKQEVEQRTSDAQRQGQIEHLNQQLEEYKMQIAEVSGEKQKL QEKLHSFSDSNTRTVKSLENRVQALQDDLDLSKSELMAVQAEYEGYKVRVHSVLKQQKKGSPDVVNEGEKMESEKLSSAE QDNEMQMEEHSRLLTRYNKLLQDVQERENGLKRSDRHFLRIEELTNEKSVYMKEQQEMIKQLNKQNENISSTLKEQMRTL KEDHHRALGVLQRQLDMSDNEVMRLQQEVRQLQHSPRPVVREQILPVSAAVTEYVPDIRHEERQEGEGSEIVDPEPLVVG HSKAVGPIPLDQLLTTGAEERVVRDQGLEMETMRENLDTANKRIEHLTELSSENEATVMRLTEQAKILKEEIRRLERNQE REKEAANMEYLKNILLKFLSLKAGDERQQLVPVLTTMLKLSPDEKGKIEAVAQGDAVGENQQAQQGGWGSYLHRWSGLT |
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