Gene
| Gene Model ID | pfu_aug1.0_8792.1_09834 |
|---|---|
| Locus | scaffold8792.1 : 15996 ... 18630 : + |
| To GenomeBrowser | scaffold8792.1:15996..18630 |
| Genes list of scaffold | scaffold8792.1 |
| Synonym | pfu_aug2.0_3831.1_05905 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8792.1_09834.t1 | 1 | 1 | Neur_chan_LBD | 27 | 218 | 3.1e-38 | 131.0 | 5.5001e-42 | 4.1e-38 | 130.6 |
| pfu_aug1.0_8792.1_09834.t1 | 1 | 1 | Neur_chan_memb | 239 | 333 | 4.3e-14 | 52.9 | 1.1e-17 | 7.8e-14 | 52.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8792.1_09834.t1 | gi|291242231|ref|XP_002741012.1| | PREDICTED: neuronal acetylcholine receptor subunit alpha-2-like [Saccoglossus kowalevskii] | 1.0e-33 |
Transcript
| Transcript ID | pfu_aug1.0_8792.1_09834.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8792.1_09834.t1 atgaggtgcaatcgctacaggttgtttgtatatgtgcagatctttgtttgcgcatcgtgtactacagtggacgaaataga cagactgtccgggactttactgaccggctacaacaagtatactagaccgccatacgacaacaaggaaacgctatatgtct atgtaacattcggactcatatctataaattactatgatgacgtcactggcaccttatccattgttgggggaccctctttt acctggaacgactaccgactcggatggaatcctgcggattactctaatattacaactttgattctacctagaactgttat ctggtaccccgaaatctacgtcattaatccagctggaaaaatggatgcttttgctaaaggacagcctctggtcgctcgta tttacccaaatggtgatgtgatcctcacctctggcgatcagataaatgtgatttgccccagcgatatggaatactttcca tttgaccgacaaacgtgcagaatacgtcttgcaatatggaattacgaagcaaatgaagtttttcttaaaagtttacacca cgaagcagacatagaatactacagcaagaacaatctttgggatttggaatccactagttgcaaagacttatctatgggga atttcgatggtttgtttgtagccgaaatgacgatgaagcgcaagtctttgttcctctgcataagcatgttcgccccattt atggtcttagcactcctaaaccctttggtgtttattttaccacaggagagcggagaaagaatttcattttcagtaacgat tctactgtcttttatggtatttatgactttgttgacagaagctcttccgagatcatccacaccggtggccagcgtgtctt actaccttctcaccttcattctctacagctcctgtataattactaccgtgatattttcctccaaagtctactggctgggt aatacaggtgaccaaataaggaaatatgaacgcattgcaaatattttgagtctgtctattctccgcagccgttcacaatg caagaagaaaggatgtgtggctgaatctgctgtgcacgagtcttctatgaatgagaaaagtatcatttatagacgaaatc cacatgatctagctcatcgacttgacaacatagcgttcacatactcaatgttattccttctgattgtgttcatagcattt ttaattcagatgaatacctaa |
|
Protein
| Protein ID | pfu_aug1.0_8792.1_09834.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8792.1_09834.t1 MRCNRYRLFVYVQIFVCASCTTVDEIDRLSGTLLTGYNKYTRPPYDNKETLYVYVTFGLISINYYDDVTGTLSIVGGPSF TWNDYRLGWNPADYSNITTLILPRTVIWYPEIYVINPAGKMDAFAKGQPLVARIYPNGDVILTSGDQINVICPSDMEYFP FDRQTCRIRLAIWNYEANEVFLKSLHHEADIEYYSKNNLWDLESTSCKDLSMGNFDGLFVAEMTMKRKSLFLCISMFAPF MVLALLNPLVFILPQESGERISFSVTILLSFMVFMTLLTEALPRSSTPVASVSYYLLTFILYSSCIITTVIFSSKVYWLG NTGDQIRKYERIANILSLSILRSRSQCKKKGCVAESAVHESSMNEKSIIYRRNPHDLAHRLDNIAFTYSMLFLLIVFIAF LIQMNT |
|