Gene
| Gene Model ID | pfu_aug1.0_88.1_57956 |
|---|---|
| Locus | scaffold88.1 : 25018 ... 40025 : - |
| To GenomeBrowser | scaffold88.1:25018..40025 |
| Genes list of scaffold | scaffold88.1 |
| Synonym | pfu_aug2.0_156.1_20350 |
Manual annotation
| Study field | signal molecules |
|---|---|
| Gene name | numb |
| Description | Best hit Apis mellifera numb-like by NCBI BLAST. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_88.1_57956.t1 | 1 | 1 | PID | 1 | 117 | 1.2e-19 | 70.6 | 4.8e-23 | 3.6e-19 | 69.1 |
| pfu_aug1.0_88.1_57956.t1 | 2 | 1 | NumbF | 137 | 145 | 1.5e-27 | 95.4 | 0.6 | 4500.0 | -2.2 |
| pfu_aug1.0_88.1_57956.t1 | 2 | 2 | NumbF | 171 | 266 | 1.5e-27 | 95.4 | 3.6e-31 | 2.7e-27 | 94.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_88.1_57956.t1 | gi|328779522|ref|XP_001123108.2| | PREDICTED: protein numb-like isoform X1 [Apis mellifera] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_88.1_57956.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_88.1_57956.t1 atgcaggtgtgtgaagaagctgttaaaacactgaaatcgcaatgcaaaggaaaataccagcgagccattctgtatgtgtc tggggacgctttgagagttgtagatgaaatcagtaagagtatgattgttgaccaaacaatagaaaaggtatcgttttgtg caccagaccgtaaccatgagaaagggtttgcctatatctgtcgtgacggcacgacacgaaggtggatgtgtcacgggttt ctggcagtcaaagagtcctggtctttcaagagcaggaatagaagatctggtgagagactgagccatgcggtcggttgtgc ttttgccatttgtttagagcgtaagcagaagcgagacaaggaatcagcatcgactgtgacggtaacgtacagtcaggacc gtaccaccttcacacgtacgggctcatttcgtcaaacaacccttacagaaaggatcacagaccctcagagtgctatactg gctgagccagtacctgtgaaaaaggtagataacccttttgcactagagcggccacgggccacaccaaacatgctctaccg tcaaggatcattcaggggctttgaaaatctacaaaaagattcatctccatttaaacgtaccacctcactacgattaagtg acctgccgtcaacattacaaagacaaaatgccgtcacagacacatctcctcaaacatcaaattcagttataacacagcca atccaagagatgtcacccagtaaagagcaagaggactccatagcccagatgtgccagcagctcacaatgggactgtccca gctcagtaccgatgatccgtttgccagctttggcagtccggtacggcaagaatctgctccggcacagaacgtaacttctt ctacattccacggcacaccaacaaaacaacaacatataccccattcacaacaagcttatcccacacctgtatcttgtcct gccccaaactcctccattcaacaacagaccaacccctgggctaacacatcatccaataatagtgtgtctatagacgggtc ttcaccatggacaacatcacaagctaccaatcccttcgcagcagctcctcctataggggctgtatctaatggtgtgcctt caggagggtacccccaaccccctcctcgtgctttcccctctcacacacgcagtcattccatagacactggtgaactgtcg ttcagtcacccttggtcgcagcgacaagttaataaaccgacattacttgagatggccaatcagcgtagtgtgcagtttaa tggtacagcatggcccagtaactctgccgccccctcagcaggggttagtgtaccgtcaaagccccaagggccgggcgtcg acccgtttgatgtggcatgggcagctaagtccacatctagtggtaatacaaacgctaacacaagcaatcctttctcttcc gcatctacatccaccacacaaaaaactttcgaggtcaagttataa |
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Protein
| Protein ID | pfu_aug1.0_88.1_57956.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_88.1_57956.t1 MQVCEEAVKTLKSQCKGKYQRAILYVSGDALRVVDEISKSMIVDQTIEKVSFCAPDRNHEKGFAYICRDGTTRRWMCHGF LAVKESWSFKSRNRRSGERLSHAVGCAFAICLERKQKRDKESASTVTVTYSQDRTTFTRTGSFRQTTLTERITDPQSAIL AEPVPVKKVDNPFALERPRATPNMLYRQGSFRGFENLQKDSSPFKRTTSLRLSDLPSTLQRQNAVTDTSPQTSNSVITQP IQEMSPSKEQEDSIAQMCQQLTMGLSQLSTDDPFASFGSPVRQESAPAQNVTSSTFHGTPTKQQHIPHSQQAYPTPVSCP APNSSIQQQTNPWANTSSNNSVSIDGSSPWTTSQATNPFAAAPPIGAVSNGVPSGGYPQPPPRAFPSHTRSHSIDTGELS FSHPWSQRQVNKPTLLEMANQRSVQFNGTAWPSNSAAPSAGVSVPSKPQGPGVDPFDVAWAAKSTSSGNTNANTSNPFSS ASTSTTQKTFEVKL |
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