Gene
Gene Model ID | pfu_aug1.0_88.1_57958 |
---|---|
Locus | scaffold88.1 : 53780 ... 69215 : - |
To GenomeBrowser | scaffold88.1:53780..69215 |
Genes list of scaffold | scaffold88.1 |
Synonym | pfu_aug2.0_156.1_20349 |
Manual annotation
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_88.1_57958.t1 | gi|291225840|ref|XP_002732906.1| | PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
egg-4cell | 2 |
8-16cell | 1 |
egg-Dshape | 1 |
>Adult tissues | |
Dshape | 1 |
maleGonad | 1 |
Transcript
Transcript ID | pfu_aug1.0_88.1_57958.t1 |
---|---|
Definition | - |
>pfu_aug1.0_88.1_57958.t1 atgtcagggtatggaggtggtagattattatgggacattgccgtagatcacagcagagatagcggaggagatgtacaaag cagtgaacattcagcagtatttatcataggcagcaaaaattctggaaagacatctataattctcagatttctggacaggg atgagattccaaaaccgactgtggcccttgaatacacatttggacggagagcaaaaggacataacattgccaaagacgta ggtcatatctgggaacttggaggaggaacatggctacacaagctgatggacgtacccataaatcctgatactatagaaca cacagcattgttcctggttgttgacctatcggttcctgaggagatctggtttacgatggagaccttgttggccgcagcca aggctcgtatagaagacgttatatcacagctacggcaggaagatccagggcttaaagatagattgacgaagaaagcatgg gaaagagtaggagaggaacacacagatagggcaatgatagacccgtttcttgtaccacttgtgatcatagggggaaaggc agatctctttcaggattttgactcggagaagcggaaagtaatctgtaaaacattaagatttatagctcattcccatggtg cttcattacagtttttcagttctaagcaagagcaattagttaccaagatgagatctttagtcagtcatcatttgtttggt acatctgccattaaggtatcagatcctaaatacgctttttgtgagtcagttacagaggatggcaaaatatcaaacgtgga ccacaataaaccgttaatggtgggggcgggagctgattcattacaagaaataggtgcgcctcctctgttagataaagata ttggtagagttcacgcaaaaaaccccatgcatttgtggaagcaggcatttactggatatttccctcaaaatgatatgttg agccctgccttggtggatgaccctgccaaggattcacaatttgcagagcatgctatagaccaattaaggtcacagaaaga tgaggaactggagagatataggagattatgtgaaaggcgagctaaggaggccctcagaggagctcagggtgatacaacat actag |
Protein
Protein ID | pfu_aug1.0_88.1_57958.t1 |
---|---|
Definition | - |
>pfu_aug1.0_88.1_57958.t1 MSGYGGGRLLWDIAVDHSRDSGGDVQSSEHSAVFIIGSKNSGKTSIILRFLDRDEIPKPTVALEYTFGRRAKGHNIAKDV GHIWELGGGTWLHKLMDVPINPDTIEHTALFLVVDLSVPEEIWFTMETLLAAAKARIEDVISQLRQEDPGLKDRLTKKAW ERVGEEHTDRAMIDPFLVPLVIIGGKADLFQDFDSEKRKVICKTLRFIAHSHGASLQFFSSKQEQLVTKMRSLVSHHLFG TSAIKVSDPKYAFCESVTEDGKISNVDHNKPLMVGAGADSLQEIGAPPLLDKDIGRVHAKNPMHLWKQAFTGYFPQNDML SPALVDDPAKDSQFAEHAIDQLRSQKDEELERYRRLCERRAKEALRGAQGDTTY |