Gene
Gene Model ID | pfu_aug1.0_88.1_57961 |
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Locus | scaffold88.1 : 86706 ... 100965 : - |
To GenomeBrowser | scaffold88.1:86706..100965 |
Genes list of scaffold | scaffold88.1 |
Synonym | pfu_aug2.0_156.1_20345 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_88.1_57961.t1 | 1 | 1 | Rap_GAP | 392 | 516 | 2.1e-40 | 138.1 | 4.76441e-44 | 3.5e-40 | 137.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_88.1_57961.t1 | gi|326680992|ref|XP_002667291.2| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_88.1_57961.t1 |
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Definition | - |
>pfu_aug1.0_88.1_57961.t1 atgacctccaggaattacgactctacagagaatattaatggaatatatacttcacactacggaatgagggctgcggaatc tgcccaacgtgggaaatccaaggtgggatttgccgatcatgagcagaaaccgagtgaaagcaatggagagaccaccaagc ttaacgaaagttttacccgcggtgggcacagggccaccatccacggtaccgatgctcgcaaatcgtggaaggggaaaggt aaacacggtaaagagaaacgttctccgaaaactcaagacgacgatgagattatggcaccgctgaaacggcggtcccgtgg tttataccgtagtaacagtaatctggaaatggacagtatagagtatatagacgtggacgatttccataacacctcattga ggagggactatggtagtacctcctcattggacctcttacagaacagtagtgatagcttcttccaaatgttgaacgactac agaggcgtcaatcttgatcaaaggagcccggctcccgctaagatgcaagagtttctccgcgggagacttgacagtcgaga gaaagaacggctagctgccaaggccgcgaatggctccgtagttacggataggagcgaggatgtttcagatagtccgaata aaaacaaatcaaaattgaaaaacaaggataggaaatctcgggctaagtcgatcacggcagagacacggcccggattattg actaaattacgggggaaagacgcggattcgggggctcgaactcccgaaaacgttgatgtagatttacgcgccgaggatag acttcgtaataaggcattcgtgcattacgattgtcagagtgcgggatttgatatcctaaatgtgcttaaaaatcagaaat tagatttgtcctccaaaaacacgtcgacaggggcgtcggcggcctcagggcagagccgaagcagtttggccccggacaaa gatggacctgacgtcactgcggacgtggacgagggggacgggaaatccagtgatctggtgcttagctgtccctattttag aaatgaactaggcggagaggaagagagaacgattagtttagaacatcaaagttattttggcattgatgaaactttggggc cagttgcaatcagcattcgtaaagagaagttggatgaccgagagaacaacatagctgattctacaggaactttttctgtc tatacaacatacaacaacagtgaaataatgtttcatgtgtcaacaatgttaccatatacacccaacaatccacaacagtt gctgcggaagagacatattggaaatgacatcgtaaccattgtattccaagagccaggagctctaccttttactccccgca cagtaagatcacaatttcagcacgtcttcatcatagtcaaggcccataacccatgcaccgacaatgtacattacagtatt gcagttagcagatcacgtgatgtaccgccctttggacctcacataccagaaaatgccttcttccccaaatctacagaatt tgctgatttcctcttagccaaaaatgttgaaaagtttggatttgcttgggatgcagacctgaagaaaggcagccgattgg tggaaatttgtaaagtcgctacggcaacattaacgcatgaacaaattgtggacttgttacggacatctgcaactgttaaa gtcacagttataccacctttagaagatggaaccccacggtaa |
Protein
Protein ID | pfu_aug1.0_88.1_57961.t1 |
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Definition | - |
>pfu_aug1.0_88.1_57961.t1 MTSRNYDSTENINGIYTSHYGMRAAESAQRGKSKVGFADHEQKPSESNGETTKLNESFTRGGHRATIHGTDARKSWKGKG KHGKEKRSPKTQDDDEIMAPLKRRSRGLYRSNSNLEMDSIEYIDVDDFHNTSLRRDYGSTSSLDLLQNSSDSFFQMLNDY RGVNLDQRSPAPAKMQEFLRGRLDSREKERLAAKAANGSVVTDRSEDVSDSPNKNKSKLKNKDRKSRAKSITAETRPGLL TKLRGKDADSGARTPENVDVDLRAEDRLRNKAFVHYDCQSAGFDILNVLKNQKLDLSSKNTSTGASAASGQSRSSLAPDK DGPDVTADVDEGDGKSSDLVLSCPYFRNELGGEEERTISLEHQSYFGIDETLGPVAISIRKEKLDDRENNIADSTGTFSV YTTYNNSEIMFHVSTMLPYTPNNPQQLLRKRHIGNDIVTIVFQEPGALPFTPRTVRSQFQHVFIIVKAHNPCTDNVHYSI AVSRSRDVPPFGPHIPENAFFPKSTEFADFLLAKNVEKFGFAWDADLKKGSRLVEICKVATATLTHEQIVDLLRTSATVK VTVIPPLEDGTPR |