Gene
| Gene Model ID | pfu_aug1.0_8806.1_09840 |
|---|---|
| Locus | scaffold8806.1 : 39527 ... 43141 : - |
| To GenomeBrowser | scaffold8806.1:39527..43141 |
| Genes list of scaffold | scaffold8806.1 |
| Synonym | pfu_aug2.0_238.1_27081 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8806.1_09840.t1 | 2 | 1 | TPR_11 | 111 | 169 | 5.7e-08 | 32.3 | 7.7e-06 | 0.019 | 14.5 |
| pfu_aug1.0_8806.1_09840.t1 | 2 | 1 | Sel1 | 141 | 174 | 3.5e-22 | 78.3 | 8.0e-12 | 2.0e-08 | 34.6 |
| pfu_aug1.0_8806.1_09840.t1 | 2 | 2 | TPR_11 | 173 | 207 | 5.7e-08 | 32.3 | 1.8e-06 | 0.0045 | 16.5 |
| pfu_aug1.0_8806.1_09840.t1 | 2 | 2 | Sel1 | 175 | 209 | 3.5e-22 | 78.3 | 1.0e-14 | 2.5e-11 | 43.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8806.1_09840.t1 | gi|260833018|ref|XP_002611454.1| | hypothetical protein BRAFLDRAFT_117215 [Branchiostoma floridae] | 3.0e-22 |
Transcript
| Transcript ID | pfu_aug1.0_8806.1_09840.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8806.1_09840.t1 ggtgcagctgtagtacttggcattcagctgtccaaacatccaaaatgggtttgtcataagaatgaagagtatagagggca gcattgcctgctatacagagtcgctcatgccctcccgatacatagtcatactggcaaggttgtcatagatggtgatagga aactacatgttgatggtgtcattggggaagagcacattcttgatggtgtaaatgatagttctgacacaaagtcagaaaat acagaaaataaggataatcatgaagatcctgttggtaaagttttctccgaatttgaagccatgtgtaaaaggtacactgg gatagcacgtaacatagaggggaacgatcaagccaaaagaggtcacatgaccaaagctgccgagagatggtcagtgggga gtcaactaggctactcaaaatcgaattttaatcttgggctgtgctatgagactggtcaaggtgtcaaaaaggatcttagt aaggctgcagagcactatcaaatggcaggcgaggatggccacccacaagccctctataacttagctctgatgtatctaga aggtagaggtgttccaaaagatccaagggaggcaatccatctacttgagaaggcagctgaatatggcctccggcaggtac gaatgagagacttgacgcatagaatttccttgtaa |
|
Protein
| Protein ID | pfu_aug1.0_8806.1_09840.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8806.1_09840.t1 GAAVVLGIQLSKHPKWVCHKNEEYRGQHCLLYRVAHALPIHSHTGKVVIDGDRKLHVDGVIGEEHILDGVNDSSDTKSEN TENKDNHEDPVGKVFSEFEAMCKRYTGIARNIEGNDQAKRGHMTKAAERWSVGSQLGYSKSNFNLGLCYETGQGVKKDLS KAAEHYQMAGEDGHPQALYNLALMYLEGRGVPKDPREAIHLLEKAAEYGLRQVRMRDLTHRISL |
|