Gene
| Gene Model ID | pfu_aug1.0_8833.1_02656 |
|---|---|
| Locus | scaffold8833.1 : 3406 ... 21518 : + |
| To GenomeBrowser | scaffold8833.1:3406..21518 |
| Genes list of scaffold | scaffold8833.1 |
| Synonym | pfu_aug2.0_1661.1_05172 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8833.1_02656.t1 | 3 | 1 | TIMP | 47 | 150 | 1.6e-22 | 79.9 | 1.8e-07 | 0.00067 | 19.2 |
| pfu_aug1.0_8833.1_02656.t1 | 3 | 2 | TIMP | 269 | 441 | 1.6e-22 | 79.9 | 1.0e-23 | 3.8e-20 | 72.2 |
| pfu_aug1.0_8833.1_02656.t1 | 3 | 3 | TIMP | 520 | 528 | 1.6e-22 | 79.9 | 0.49 | 1800.0 | -1.7 |
Transcript
| Transcript ID | pfu_aug1.0_8833.1_02656.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8833.1_02656.t1 atgacaagaaacaagtcttaccttaaaatgaacacaggatatatcataatactacattttaacgaatacgagtatcttgt tgcagattcccttgctgtcgtcatcttccttctcctctgtcatcttgcatctttcatcaatgcccaggcgtgtgtccctg aacatcctcaaaggaacttctgtgaagcagcatgggctatcaaaggcaaagtgattgagttcatggacacacccagcaac ataagaggggacgctccaatagagagacagtatcatataagggtggatagagtgtataagatttcaacatgtcatggcgc caattgttatcaacctgtgcagagaagtggatgtgtcaacaacaacaacgagagaagtctggatgtatgtgtattcaaca acaatctgggaacatgtgactggaacgcttgtggactactagaaaacaaaagacggaaagcctttattgaacgaaggaaa aatttagcattgggtcccgcatatcaacagcaaaaacaacaacaacaagctcaaatacaacagcaactggcattgcaaca acaacagcaacgtcaacaacagcaatatttacaacagcaacaagaacagtatcaacaacagcaacttttgcaaacgatac agcaacatttacaacaacaacaagcgcctccgacaacagcagcaccatctttatttgatgtgggaatgggtggtatgggt atgggtatggcgattggagaggacgacctcgtgacctttgtcctgtttttagtcttgcttcacgaggctcgtgtaacacc aatgatatgttcccctgaacatccacagagaaattactgccaatcagcatgggtaatcaaaggtacaatattatcctata cccacaaccccagcaccatggaagtatatccaccaatagagaggctgtatgaagtacagatacacagactattcaaggct tacaatgtgtcggatgctatttggtatgaggggagtatagcatcgatatctacagatggtgacttgaacggaacaggagt ggacatgttacaaggggaaacgtatatcatatcaggtagtacatttgagggtcaggccatcatcacaaagtgtaactggt accaactatggaatacgttaagtccatgccatgagtccgccttggaaacaggaatttttgataaaaattgctactgtccg gttgcaacttgcatggggaagatgtgttaccaacaagtgcaaaatcctggctgtgtaaattacgattacacccatacata tgacacgtgtgtctacgagtctacattcaacacctgtagctggaagaaatgtgaacatgttgtagattctggcttaaata caccaacaaaccttcaagtgtcaagtagccagcaacaaggacgggccttcgctgctcctcatgagcaaagtggacaaatg gcaactccattgcagcagcagcaacaacaacaaatgacacaactctcgcagggaggagcacaggcagctcatgcgaattt gcaacagaatctaaattcgaaatttcagaatttgcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaac aacaacaacaacaacaacaacaacggagttggagcacaataggaactaggaactcgctaggagcaccacagagcgcactg gaaatgcgatacgcatacctgagaaatcgtaacagacagagacggaggagaaagggtttatctgcactgatgaatgtttt ctcataa |
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Protein
| Protein ID | pfu_aug1.0_8833.1_02656.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8833.1_02656.t1 MTRNKSYLKMNTGYIIILHFNEYEYLVADSLAVVIFLLLCHLASFINAQACVPEHPQRNFCEAAWAIKGKVIEFMDTPSN IRGDAPIERQYHIRVDRVYKISTCHGANCYQPVQRSGCVNNNNERSLDVCVFNNNLGTCDWNACGLLENKRRKAFIERRK NLALGPAYQQQKQQQQAQIQQQLALQQQQQRQQQQYLQQQQEQYQQQQLLQTIQQHLQQQQAPPTTAAPSLFDVGMGGMG MGMAIGEDDLVTFVLFLVLLHEARVTPMICSPEHPQRNYCQSAWVIKGTILSYTHNPSTMEVYPPIERLYEVQIHRLFKA YNVSDAIWYEGSIASISTDGDLNGTGVDMLQGETYIISGSTFEGQAIITKCNWYQLWNTLSPCHESALETGIFDKNCYCP VATCMGKMCYQQVQNPGCVNYDYTHTYDTCVYESTFNTCSWKKCEHVVDSGLNTPTNLQVSSSQQQGRAFAAPHEQSGQM ATPLQQQQQQQMTQLSQGGAQAAHANLQQNLNSKFQNLQQQQQQQQQQQQQQQQQQQQQQQRSWSTIGTRNSLGAPQSAL EMRYAYLRNRNRQRRRRKGLSALMNVFS |
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