Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_8833.1_02657
Locus scaffold8833.1 : 30146 ... 31673 : +
To GenomeBrowser scaffold8833.1:30146..31673
Genes list of scaffold scaffold8833.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_8833.1_02657.t1 2 1 PC4 47 94 1.5e-10 40.1 5.4e-13 8.0e-09 34.6
pfu_aug1.0_8833.1_02657.t1 2 2 PC4 134 148 1.5e-10 40.1 0.0036 53.0 3.1

Transcript
Transcript IDpfu_aug1.0_8833.1_02657.t1
Definition-
>pfu_aug1.0_8833.1_02657.t1
atgtcactgacaagcaaaacaaaagacgagtcagagtgtggtgaatcactgatcattgatttggacaataatactgaaaa
acctgacaaaaaagaagtcaagagatcaaaaatcggcaaaaatgagcagaggtgtataatcaacgtcagtgataatgttt
ttgtggtggcaaaagcatacaaagatgatatgaatttacatataagacagtttgacgataatgaagacgggaagttgttt
ccaaccaagaaaggagtaacctttcccttgaagagatgggttttcttcgaatctatagtatcggatattgcagaagggct
gaagacctactcagacttagagtcggaacaaacatggcatctcggtggtggtgattacgcatctattacacctgaatatc
cgacagtcaatattcgacatttttggcaacctgatgatgctacagaacccgtactgaccaagtga

Protein
Protein IDpfu_aug1.0_8833.1_02657.t1
Definition-
>pfu_aug1.0_8833.1_02657.t1
MSLTSKTKDESECGESLIIDLDNNTEKPDKKEVKRSKIGKNEQRCIINVSDNVFVVAKAYKDDMNLHIRQFDDNEDGKLF
PTKKGVTFPLKRWVFFESIVSDIAEGLKTYSDLESEQTWHLGGGDYASITPEYPTVNIRHFWQPDDATEPVLTK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495