Gene
| Gene Model ID | pfu_aug1.0_8859.1_02662 |
|---|---|
| Locus | scaffold8859.1 : 11089 ... 34055 : - |
| To GenomeBrowser | scaffold8859.1:11089..34055 |
| Genes list of scaffold | scaffold8859.1 |
| Synonym | pfu_aug2.0_1310.1_01538 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8859.1_02662.t1 | 1 | 1 | Helitron_like_N | 1119 | 1277 | 7.8e-24 | 84.4 | 4.2e-27 | 7.8e-24 | 84.4 |
| pfu_aug1.0_8859.1_02662.t1 | 1 | 1 | PIF1 | 1624 | 1945 | 1.1e-27 | 96.9 | 5.0e-29 | 9.3e-26 | 90.6 |
| pfu_aug1.0_8859.1_02662.t1 | 1 | 1 | AAA_30 | 1631 | 1830 | 3.2e-13 | 49.6 | 4.8e-16 | 8.8e-13 | 48.2 |
| pfu_aug1.0_8859.1_02662.t1 | 1 | 1 | AAA_19 | 1641 | 1701 | 5.2e-06 | 26.1 | 6.0e-09 | 1.1e-05 | 25.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8859.1_02662.t1 | gi|34365520|tpg|DAA01286.1| | TPA_exp: replicase/helicase/endonuclease [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_8859.1_02662.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8859.1_02662.t1 atgtcattttcactgccgctcgataacggtcccgcgcccgcgcttccctatcccgtgtgttgggtaccgcttacatcact tcggacgtcatcattttgtgggtcgggcgctacttccattgcctctgtggactcgtctaaccaatggtcgtcactttggt cgtacagtacttcattgacgaataatcgcgttcgagtttcacatgctcaccatcgttccaaaactggttcattacgggta cgagactgcggcgtctctcggacatttcggccggatattgcccgagacacggtacggcgatcctctcaacacaggagcgc gttgcaacaccaggtcaaggtcatcttgataaatgaatctcgctacgactggtcgagctctgtttcgttggtgcctcccg aacctatggatatttccaaactgaatgtctttattttcgtgagtttcgatgtgatgatgtccaactttctatttgtatct gccgtttccttttgtaagtcctttagtttagttttaacttcaataagttccaagagtggaagatgcgaggcgagcgtcga ggcagccctggatgttgatgtactgtatgaaggagataatttgtataaaaaagttgtaatggacttgaaaagagagggaa gatacgtaaattctctgctatctttcaatgaacttccttcagctttagaatacaaagacaaatattattcagtcaatcat tattcctctatatatggtgtatcaattgtggaaaacaacaccgaagctctatccttacatgaaggaatcatatttggtct tgcaaagtcacaacacttacttatcatgtatggagctctgtgttctgcaattatgtttatagatggaaagtacttatttt ttgattctcattcacatggagatgatggtctgaatgcaccagatggaaaatcgatgctgaaagtgttttcttccattgac aatttaattgcatttttgtattcattttacaccagctgtaatatagacttgcaatctcagtttgaaatattgcctgtcgt tgttaatctaattcagcatgatttcttacaagaacagatgagttatcaaaatggtcaagcagagtctcatggttcaaaat caaatgaaaaaaactgtctgtcaagaaacaaaaatagtgaacagtatatagatatagaaggacaaagaaatttgcatgtt gaccgaaaattgaaggcaaacataagatatcgagaaaaagaactattgggtaaaagaaaggtgattgatgatgatacatt ttatgacaaagacattgttgacaaaaggaaaaactacatgagagattatatgcaaaaaaggcgcaaatgttctaaattca aacttcaagaagcaagagctaagaaagagactagatgtgaaaatgagtatcgacaaaatgaaagagagagagaattatct gcaaaaagaaagtgcagaaaagatcaacagtataaaaagaaagaattaactgcaaagaggatgaaaagggcagatatgca gtgccgaaacgatgaaagaaaaagagagttaactgcgaagagaattaaaagagaagatgaacagtataaacagaatgaat tatctgcaaagaggatgaaaagggcagatatgcagtgccgaaacaatgaaagaaaaagagagttaagtgcgaagagaatt aaaagagaagatgaacagtataaacagaatgaattatctgcaaagaggatgaaaagggcagatatgcagtgccgaaacaa tgaaagaaaaagagagttaagtgcgaagagaattaaaagagaagatgaacagtataaacagaatgaattatctgcaaaga ggatgaaaagggcagatatgcagtaccgaaatgatgaaagaaaaagagagttaattgcgaagagaataaaaagggcagat atgcagaaccgaaattatgaaagaaagagagaattggcctccaaaaaatttatgagaaaaaacaggatctttagactgaa ggagagattaattgagcttcaaagtaagagaaatgccagagaaaataagttatttttagaagctgaaagattgaaaaaga gagaacttagaaaatcaaaggctgacaagatgtgtttacgtgaaagggagtcagataagaatagaaaaataaataatcga agcatcaagtcatacaagaaaaaggagaaggacattgagaacattaagaaatatggatcaaatattatggaatgtattag aatttttcatgcatgtacaagtagtggtcccgtttatgtttgctctgtatgccatcagacatggttctatgatagtgttc ataaagttgttaatataataaaggttgacttcaaacctgggattcttactggacttaagtctgcagaggacaaggaatgg atttgtagaacttgcctctcaaatgtaaagaatgataaagttcctaaagtatcagttctaaatggaatgaaatggcctga tcaacctcctgaattaaaattacatcctatggaagaaagagtcattgctcttagaatcccttttatgcaaatgagagaat tgcctagaggaggtcaattttgtgtcaaaggcaatgtgattaatgtacctgttgatatacaaccaactataaaagctctc cctagacaagtagatgaaacatgcactatacctgtgaaactgaaaaagaaaatgacatacaagaaggttgactttacgga aaatattagaccagctgttgttttgtctgctcttcattggctaatgtcaacaagtgaattatacaaagattcaggtgtta atattgataacagttgggagaacactatcacaagagattgtcgagagatagttcaagagtttctaagtggaaattcaaca attaataatgatagaaatggctatcatgagaacactaaaaactcaagtgaagaagtgaatgatcagttgatagtaaatga taaagatgccgaagatgaaacaggctacgaatctgatcattttagtgaaattgatagcaatgaaattgtcacgggcaatg cagacaccttgttagaggatgaagctttgaatacggacaagtcctatacatttgctccaggtgaaggacaacacccttta agtttgttcaccgataaagatgcagagtttctctcatttccaacaatttattgtggacaaagacggcttgaaaataaaga gagattggtacctgtgcattatagtgatattgctaagtgggaacttagaagtgttgatcgtagagcagcacgatctgttc ctaatattttttttaaattgaagaaaattcaattaaaacaaataagcgacaaagttcaattggcagtaagaagaattaaa acaaaggggaaaaaaataaccgctgctgaagccagagatcagtcaacacttgataatattgtgcggttagatgaaggata ttatatttttagacaacttcgcaactctcccgcttacttagcaaccaaaaagaaagatgtgtttgctatgattagacaaa ttgggctgccaacatggttcatgtctctttcttcagcagacacacgatggccatttttattaaaagctcttgctaaactc gatggaaaaattctatcagattcagacataaagaatttgtcctggcaagaaaaaagcagtttagtacaaaaggatcctgt cacttgttctcggatctttaatgatagagtacagcagtttattaaagtgttcctgaaaagcccccatgaacctattggtg ttgtaactgattacttgtaccgtgttgaatttcaacaaaggggttctccgcatatacatatgcttgtatggatagctgat gcgccaaagtatcagaaagaccataatgagtcaatagaacaatttgttgaccaatacattacatgttcaaatgaaaaaga agagttgtgtggtttaattgatctgcaaacacacaagcattccaagacctgtagaaagaagggcaaagctgtatgtaggt ttgggtttccgcttcctccattacgtaagactatgctgttagaaccactagagacagatattgacaagcacaaaaagaaa tatgatgaaatccaaaataagatcaattcattcaaagatggcatgaacttttcatttgatcagtttttgaatgaaattgt aggaatgtcagaagacgaatacatcaagtgtattagaagctctatcaacggccctaaagtgtttctgaagagaatgccct cagaaatcagagtcaatatgtacaatgaacatgtactcatggcatggaatgctaatattgacttacaatatgtgttggat ccgtatgcatgtgccatgtacattgtatcttacattagtaaatctcaaagaggaatgagcgctttgatggacagagcatg caaagaagcaagacaagggaacatggatataaaaaaacaagttcgtcatatcggtaaccattttttgaatagtgtagaag tcagtgcacaggaagcatcctatttagtattacaaatgcctctaacgaagggttcaagagatgtgatattcattaatacg tctccaccagaagaaagagtctttcttttaaagcaattgtctgatcttgaagagcttagtcccaactccaccgatatcca ttaccaaaatataattgcaagatattccaaaagacctagacaactagagaactggtgccttgcagactatgcatcacagc ttgaagtgaaatatccaaaagacaaaaataaaattgacgaagaagagataaatgatgatgacattgaagtagatgaagat gatgacttggaattttccgaggatgatactcttgtcactcttaaaagtgggataataataaggagacgtatacatgacct gattttgcgatatactaaagatgagccaatttatgcatttttatcaggaggtgctggtgttggaaaatcagtattgatca aagctatctaccaagctttacacagacagctacactcagcagatggagaagatccaagtgacatcagaatattactttgt gcatttaccggaaaagcagcatataacatcaatggcattacaattgcctctgcgttccacaagaagtataaccagacaaa ccagtcaatgagctccgatgaactgaatactttccgaatgaagtacagaaatctatctgttgtgataattgatgaaattt caatggttggtggcaagatgttaagcttcattgactgtagattgaaacagttaactggaacaaataaaccatttggtgga ataagcataattgctgttggagacctgtatcagttgcaacctgtaggggattcatggatatttaatgacttgtctattgg acctcaagttctagcaacaaacttatggaaagaacatttctctttgtttgaattaacggaaatcatgagacaaaaagatg acacagattttgccaaccttctgaacaggttacgaacgaatgatttaactgcaaaagacaaaaacgaaattaataaacat attatcagccctacacaggaaaactacacgaataatgcaccgcatttgtttattgaaaacaagtttgtagacagcttcaa cagagagtttatgcaaaatttaagtacaactaaagttgaagttgccagtcatgattctgtaatagcagatgttccgaaat caaacaaagaaagacttctcaaaagccttccaaatgattcgagcaaaactgcaaatttagcacgttcgctaattgttgca actaatatgatttatgacattaccattaatcttgatgtaaatgatgggatagcaaacggttctagctgtattgttaaatt catagaaaaccgaattcctcaaacaacaagaccaagcattgtttgggttctgtttaacgacctttctattggatccaaca caagacagaagtataaacatttgtaccacagagaaattgacccatcatggacacccatttttgaagttaatcgcaatttt ctctacaattataaatcttttcagagaacacaatttccacttaaaccagctgcagcaaaaactgttcacaaatcgcaagg atgtacagtagacaagctggtcattgatttatcgcaaacaagaacaaggaaaattcctcatatacattatgtagcaatga gtagagtaagaaaatttgaaaatcttcaaattttaaattttaatagtgatgcacttacagctgatgaacgagtcaaagac gaaatgaaaagacttcgagaagaggcacccatgaaattatgttacactcctttatataaagtagatccatgcagatttaa aatagcttttaacaatgcgagatcgcttcacaggcatttccatgatatttctctagatccaaatatctctgccgcagaca ttattggtattacagagtcaaggttatgctctttagatcataatgaaacatattcactcgaaggttttgaaatgatcaga tgtgatcagaacattcaggcaacgaacagaagaccaagtcatggacttgtgttatatttgagatatggcttactgactag agaaatattcaagtacatctctgacaatttggaatttttgatatgtgagacatctcattcagtagctggattctttcaac tagtgcttgtgtacaaatctccggtatgtgtattttcagaattcaaaaactctttcctaaaccacctcttaccaaagatc gccttatccaaatctttgcttatttttggtgatttcaatttcgatatttcatctggtcacagagactttttgaacttcat gtctgaatactttcattgcaatcagtatgtaaacaaaaagaccaccaatacgaattcgactcttgacttagttttcgcaa atacacctcatgttttcacggaagcaattgagtccttctggtcagatcataaagtaatgactgcaattatctga |
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Protein
| Protein ID | pfu_aug1.0_8859.1_02662.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8859.1_02662.t1 MSFSLPLDNGPAPALPYPVCWVPLTSLRTSSFCGSGATSIASVDSSNQWSSLWSYSTSLTNNRVRVSHAHHRSKTGSLRV RDCGVSRTFRPDIARDTVRRSSQHRSALQHQVKVILINESRYDWSSSVSLVPPEPMDISKLNVFIFVSFDVMMSNFLFVS AVSFCKSFSLVLTSISSKSGRCEASVEAALDVDVLYEGDNLYKKVVMDLKREGRYVNSLLSFNELPSALEYKDKYYSVNH YSSIYGVSIVENNTEALSLHEGIIFGLAKSQHLLIMYGALCSAIMFIDGKYLFFDSHSHGDDGLNAPDGKSMLKVFSSID NLIAFLYSFYTSCNIDLQSQFEILPVVVNLIQHDFLQEQMSYQNGQAESHGSKSNEKNCLSRNKNSEQYIDIEGQRNLHV DRKLKANIRYREKELLGKRKVIDDDTFYDKDIVDKRKNYMRDYMQKRRKCSKFKLQEARAKKETRCENEYRQNERERELS AKRKCRKDQQYKKKELTAKRMKRADMQCRNDERKRELTAKRIKREDEQYKQNELSAKRMKRADMQCRNNERKRELSAKRI KREDEQYKQNELSAKRMKRADMQCRNNERKRELSAKRIKREDEQYKQNELSAKRMKRADMQYRNDERKRELIAKRIKRAD MQNRNYERKRELASKKFMRKNRIFRLKERLIELQSKRNARENKLFLEAERLKKRELRKSKADKMCLRERESDKNRKINNR SIKSYKKKEKDIENIKKYGSNIMECIRIFHACTSSGPVYVCSVCHQTWFYDSVHKVVNIIKVDFKPGILTGLKSAEDKEW ICRTCLSNVKNDKVPKVSVLNGMKWPDQPPELKLHPMEERVIALRIPFMQMRELPRGGQFCVKGNVINVPVDIQPTIKAL PRQVDETCTIPVKLKKKMTYKKVDFTENIRPAVVLSALHWLMSTSELYKDSGVNIDNSWENTITRDCREIVQEFLSGNST INNDRNGYHENTKNSSEEVNDQLIVNDKDAEDETGYESDHFSEIDSNEIVTGNADTLLEDEALNTDKSYTFAPGEGQHPL SLFTDKDAEFLSFPTIYCGQRRLENKERLVPVHYSDIAKWELRSVDRRAARSVPNIFFKLKKIQLKQISDKVQLAVRRIK TKGKKITAAEARDQSTLDNIVRLDEGYYIFRQLRNSPAYLATKKKDVFAMIRQIGLPTWFMSLSSADTRWPFLLKALAKL DGKILSDSDIKNLSWQEKSSLVQKDPVTCSRIFNDRVQQFIKVFLKSPHEPIGVVTDYLYRVEFQQRGSPHIHMLVWIAD APKYQKDHNESIEQFVDQYITCSNEKEELCGLIDLQTHKHSKTCRKKGKAVCRFGFPLPPLRKTMLLEPLETDIDKHKKK YDEIQNKINSFKDGMNFSFDQFLNEIVGMSEDEYIKCIRSSINGPKVFLKRMPSEIRVNMYNEHVLMAWNANIDLQYVLD PYACAMYIVSYISKSQRGMSALMDRACKEARQGNMDIKKQVRHIGNHFLNSVEVSAQEASYLVLQMPLTKGSRDVIFINT SPPEERVFLLKQLSDLEELSPNSTDIHYQNIIARYSKRPRQLENWCLADYASQLEVKYPKDKNKIDEEEINDDDIEVDED DDLEFSEDDTLVTLKSGIIIRRRIHDLILRYTKDEPIYAFLSGGAGVGKSVLIKAIYQALHRQLHSADGEDPSDIRILLC AFTGKAAYNINGITIASAFHKKYNQTNQSMSSDELNTFRMKYRNLSVVIIDEISMVGGKMLSFIDCRLKQLTGTNKPFGG ISIIAVGDLYQLQPVGDSWIFNDLSIGPQVLATNLWKEHFSLFELTEIMRQKDDTDFANLLNRLRTNDLTAKDKNEINKH IISPTQENYTNNAPHLFIENKFVDSFNREFMQNLSTTKVEVASHDSVIADVPKSNKERLLKSLPNDSSKTANLARSLIVA TNMIYDITINLDVNDGIANGSSCIVKFIENRIPQTTRPSIVWVLFNDLSIGSNTRQKYKHLYHREIDPSWTPIFEVNRNF LYNYKSFQRTQFPLKPAAAKTVHKSQGCTVDKLVIDLSQTRTRKIPHIHYVAMSRVRKFENLQILNFNSDALTADERVKD EMKRLREEAPMKLCYTPLYKVDPCRFKIAFNNARSLHRHFHDISLDPNISAADIIGITESRLCSLDHNETYSLEGFEMIR CDQNIQATNRRPSHGLVLYLRYGLLTREIFKYISDNLEFLICETSHSVAGFFQLVLVYKSPVCVFSEFKNSFLNHLLPKI ALSKSLLIFGDFNFDISSGHRDFLNFMSEYFHCNQYVNKKTTNTNSTLDLVFANTPHVFTEAIESFWSDHKVMTAII |
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