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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_8877.1_31665
Locus scaffold8877.1 : 79336 ... 84714 : +
To GenomeBrowser scaffold8877.1:79336..84714
Genes list of scaffold scaffold8877.1
Synonym pfu_aug2.0_447.1_24034

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_8877.1_31665.t1 gi|310788579|gb|ADP24262.1| TNF receptor-associated factor 6 [Haliotis diversicolor] 8.0e-18

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_8877.1_31665.t1
Definition-
>pfu_aug1.0_8877.1_31665.t1
atgaaggcgtgtcccacatgtcagagagaggatgctttccctcttctcaggccaaacattcctgaggacacccttgccat
acagagatgtcttggagtgagggcgtgtactaataaaggatgtggtatggagttctgggagtgggaactggagaatcata
tcagagtttgtcctagcagacaggaaacccctgatatcaagtcaagaaaagttagcatcacttccttaaacattttacct
caaagaacaaggaatgggcaagaaaaaccagagggtcgtagagtaacaaggagcagtacatttagtggacgtacacgtcc
cagtatctctcggcgaatgtcagccaggctagttctcacacctgtacaagtgaacaataataccaattaa

Protein
Protein IDpfu_aug1.0_8877.1_31665.t1
Definition-
>pfu_aug1.0_8877.1_31665.t1
MKACPTCQREDAFPLLRPNIPEDTLAIQRCLGVRACTNKGCGMEFWEWELENHIRVCPSRQETPDIKSRKVSITSLNILP
QRTRNGQEKPEGRRVTRSSTFSGRTRPSISRRMSARLVLTPVQVNNNTN

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