Gene
| Gene Model ID | pfu_aug1.0_88799.1_06111 |
|---|---|
| Locus | scaffold88799.1 : 859 ... 1950 : - |
| To GenomeBrowser | scaffold88799.1:859..1950 |
| Genes list of scaffold | scaffold88799.1 |
| Synonym | pfu_aug2.0_287.1_23809 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_88799.1_06111.t1 | 1 | 1 | Cpn60_TCP1 | 2 | 79 | 2.8e-18 | 65.7 | 2.1e-22 | 3.1e-18 | 65.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_88799.1_06111.t1 | gi|198432709|ref|XP_002131299.1| | PREDICTED: T-complex protein 1 subunit beta-like [Ciona intestinalis] | 1.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_88799.1_06111.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_88799.1_06111.t1 ctaccaaccacaatagctgataatgctggttatgatagtgcacagttaatatcagagttacgggcccttcacactgatgg caaacataccatgggactgaatatgactgatggagaagtggctgacgtagagaagatgggcataacagaatcgttccagg tcaaacggcaaatgttacttagtgcatcagaagccgcagaaatgatcatcaggattgatgacatcatcaaatcagcaccg cgaccaaggcaaccggaccatagaggacactag |
|
Protein
| Protein ID | pfu_aug1.0_88799.1_06111.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_88799.1_06111.t1 LPTTIADNAGYDSAQLISELRALHTDGKHTMGLNMTDGEVADVEKMGITESFQVKRQMLLSASEAAEMIIRIDDIIKSAP RPRQPDHRGH |
|