Gene
| Gene Model ID | pfu_aug1.0_888.1_07729 |
|---|---|
| Locus | scaffold888.1 : 22788 ... 30005 : - |
| To GenomeBrowser | scaffold888.1:22788..30005 |
| Genes list of scaffold | scaffold888.1 |
| Synonym | pfu_aug2.0_383.1_10705 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_888.1_07729.t1 | 1 | 1 | Neur_chan_LBD | 30 | 233 | 6.0e-35 | 120.3 | 1.6e-38 | 8.1e-35 | 119.9 |
| pfu_aug1.0_888.1_07729.t1 | 1 | 1 | Neur_chan_memb | 244 | 371 | 2.7e-18 | 66.7 | 8.1e-22 | 4.0e-18 | 66.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_888.1_07729.t1 | gi|320089455|dbj|BAJ65320.1| | 3.0e-39 |
Transcript
| Transcript ID | pfu_aug1.0_888.1_07729.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_888.1_07729.t1 atgatgcatgaacaaattctgctcttttttggtcttctgtgtgtattatgtttcaatctatcaaaaggaaagaccattca atcaacatacaaattgtacaatgatttacttgccaattatacatcagacatcagacctgttgacgatgacaacgacatac ctaacgtgactacaacgctgtacctctccggcatcttagaactggacgaaccaagaggacaacttacttcggctttatct atgaccttaatgtggaaggacatactgctgacctggaatccagcagattacgaattgagataccaaattgagatttctaa gaaacatatttggactcctgaattgatgcttatatcaccaagtcaatctgctgaaaaactcggcaaagacagcaataaag ttctgattcacagttacggtgcaggtactggattcctatcgttaacaatcattgatatattttacacaatatgcgatact gaagtcacgtattttccgtttgatacccaaatttgtgaaataagattttctcagtatgattatgcagccaagattcgata tgtgatcttagaaaacgcgatgaatacagatttctttctagagaacggtgtttggaatgttgagaaaactgagttattta cagagaatagaaacaactttaactacgacgttgtaggtaggatacacatgaaaagaagatccacatattactctttaaat ctgctaggaccgatacttatcttgatgcttctgaactgcatggtatttttgctacccgccgagagtggagaacgtgtagg ttttgcagtcacaattcttctagccatagctgtatatatgacaatcatagcagataaattaccaaatacatccaaaccag tatcagttcttacgttcattcttgtcatatacatggcgcagtcgtcgatgatatgtgtctgtacaatatttagcctacgg atagttttccgagacgagaagacaccagtttcaaagacatggaatatattcgttcgaattatgaaatgttgtagaagtcg tgtcgcacatgaacacaacgatcaccttgcatcatctgaagaaaccaagtctgaaaccaaagaaaagtcagaacatgacc agggaatcacatag |
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Protein
| Protein ID | pfu_aug1.0_888.1_07729.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_888.1_07729.t1 MMHEQILLFFGLLCVLCFNLSKGKTIQSTYKLYNDLLANYTSDIRPVDDDNDIPNVTTTLYLSGILELDEPRGQLTSALS MTLMWKDILLTWNPADYELRYQIEISKKHIWTPELMLISPSQSAEKLGKDSNKVLIHSYGAGTGFLSLTIIDIFYTICDT EVTYFPFDTQICEIRFSQYDYAAKIRYVILENAMNTDFFLENGVWNVEKTELFTENRNNFNYDVVGRIHMKRRSTYYSLN LLGPILILMLLNCMVFLLPAESGERVGFAVTILLAIAVYMTIIADKLPNTSKPVSVLTFILVIYMAQSSMICVCTIFSLR IVFRDEKTPVSKTWNIFVRIMKCCRSRVAHEHNDHLASSEETKSETKEKSEHDQGIT |
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