Gene
| Gene Model ID | pfu_aug1.0_8881.1_45953 |
|---|---|
| Locus | scaffold8881.1 : 1 ... 17698 : + |
| To GenomeBrowser | scaffold8881.1:1..17698 |
| Genes list of scaffold | scaffold8881.1 |
| Synonym | pfu_aug2.0_88.1_26825 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8881.1_45953.t1 | 6 | 1 | LRR_4 | 700 | 735 | 3.1e-07 | 29.8 | 0.09 | 220.0 | 1.5 |
| pfu_aug1.0_8881.1_45953.t1 | 10 | 1 | LRR_6 | 751 | 771 | 3.8e-10 | 38.7 | 0.0096 | 24.0 | 5.4 |
| pfu_aug1.0_8881.1_45953.t1 | 6 | 2 | LRR_4 | 751 | 789 | 3.1e-07 | 29.8 | 1.6e-08 | 4.0e-05 | 23.1 |
| pfu_aug1.0_8881.1_45953.t1 | 10 | 2 | LRR_6 | 775 | 794 | 3.8e-10 | 38.7 | 2.5e-05 | 0.062 | 13.4 |
| pfu_aug1.0_8881.1_45953.t1 | 10 | 3 | LRR_6 | 803 | 823 | 3.8e-10 | 38.7 | 0.00092 | 2.3 | 8.5 |
| pfu_aug1.0_8881.1_45953.t1 | 6 | 3 | LRR_4 | 803 | 845 | 3.1e-07 | 29.8 | 0.00049 | 1.2 | 8.8 |
| pfu_aug1.0_8881.1_45953.t1 | 10 | 4 | LRR_6 | 830 | 847 | 3.8e-10 | 38.7 | 0.3 | 730.0 | 0.8 |
| pfu_aug1.0_8881.1_45953.t1 | 10 | 5 | LRR_6 | 861 | 879 | 3.8e-10 | 38.7 | 0.45 | 1100.0 | 0.2 |
| pfu_aug1.0_8881.1_45953.t1 | 6 | 4 | LRR_4 | 886 | 926 | 3.1e-07 | 29.8 | 0.028 | 69.0 | 3.2 |
| pfu_aug1.0_8881.1_45953.t1 | 10 | 6 | LRR_6 | 913 | 927 | 3.8e-10 | 38.7 | 0.001 | 2.5 | 8.4 |
| pfu_aug1.0_8881.1_45953.t1 | 6 | 5 | LRR_4 | 966 | 1002 | 3.1e-07 | 29.8 | 0.59 | 1400.0 | -1.0 |
| pfu_aug1.0_8881.1_45953.t1 | 10 | 7 | LRR_6 | 991 | 1010 | 3.8e-10 | 38.7 | 0.006 | 15.0 | 6.0 |
| pfu_aug1.0_8881.1_45953.t1 | 10 | 8 | LRR_6 | 1020 | 1037 | 3.8e-10 | 38.7 | 5.6e-05 | 0.14 | 12.3 |
| pfu_aug1.0_8881.1_45953.t1 | 6 | 6 | LRR_4 | 1020 | 1067 | 3.1e-07 | 29.8 | 1.2e-05 | 0.03 | 13.9 |
| pfu_aug1.0_8881.1_45953.t1 | 10 | 9 | LRR_6 | 1049 | 1067 | 3.8e-10 | 38.7 | 0.9 | 2200.0 | -0.7 |
| pfu_aug1.0_8881.1_45953.t1 | 10 | 10 | LRR_6 | 1075 | 1086 | 3.8e-10 | 38.7 | 0.016 | 40.0 | 4.7 |
Transcript
| Transcript ID | pfu_aug1.0_8881.1_45953.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8881.1_45953.t1 cacaaataagggtagtaatcacggctagaacggcccatactgagaatggtcctgtatgtttggacggacataattgcgga gagactgatcagcctaccgttgacatgcctcatggagagcttaaacccggaactgagttgtggaaaactttagagagcag aatcatagcaaaagaactgatcgactatgtgaaagcattcacttttgaagaagagtatgaactacgttacaagattgaag gaggaggaaatctagtggctacaagggcacttttgatgaagttactgaagaaaaatcatggccttgataaactgatagag gctctatctgaaacagacctagggttacaagatttggcggagaaactgaaagaattcagacaaatgcaacaagagatgaa tgaacaagagggagctgtgccgaacacaggcgctgatgatgttattgatggtggtctacctattgatgaacagctaaata gatcagcaaaaccatattgggaaggtcttagtgtaaaagatcatgccaaacatgtcttgattacgaatataaataagatg atggaaaaagcagtcgaagagggaaatttccctcagtttgaaaaattatctgaaagacttgaattggttataaagaattg tgataatggatcgatcataattacactgaacattggcagcatagagagccttgataccttacagagtttatatgagggag gggtactgtctaacgtcatacacaaggatctattaactgacgccaagatgaaattccttcgtgaaaacagtggaaaagat ttgcagaacatcgaatttggtgtacacatcaacccatttgacttccagtactgtaggatgaacttaatgaagaacaaagt tgtcacattgccaaacagcagtgttgagagtgtggctgtgtttaagctgggatctactggaatgacaaaagagaagtatg atgaattcagatcatcagtgacaccttccctcaggaggtcaatggaggatgtttttgtccaggaaaggatgactcgagta tatgatctcctagaacatggtgatgtaggggccttcacactgagctacctggaactgctttacaatgaactgttcgaatt cataaacaaccacacgtgcaaaggcccattacaggatattggtaacctgatgtccagagctgttcgtttcagtggtgcct tagtcaatggctatttccaatttgagcttacccctgcttctccaagagaaagtggaatctgcctgtcagcacttagcgga ggtgaccgcgtgttgatgccaagtgatttgtggaatcaactgctggaagagaaggtactagcggagagaagagagaacgt gttcacgttcagcagtatcctactacaggacttcctgatgatgccgatcagtaaacagcgatctgagtctggtattgtcc ttacagacttctcacaggctgataccacaacagtagagcattccctacagaacaatttcttccatctcttcacaaacttc ctttaccagttcttcacaaacacgtcatccatgtcttccatggaattcactgttagagatattttccaccttcccctaca agacacaagcaaggaccagattttcgagttggttgttcttgccactactgcagcaaaattgaagaatttacccagagctt cactgaatagcctgatgacctcaatttgtctccatctgtttccaagcggagatgtcaaatttctgtctgaagaattttcc attctgaagaagcaagcgctcagagcctttctgtcgttctccaatcttccaggatttattgagtccatagaagtgcacaa aggaatttcctggcagaaaggtaactcatccgtatccttctctgatgttccagtcagtgacttaacagaggtcatgaccc tacttcatactgggagctgtttaggtagtgtagaggtcaccttgcatactggagatgagggacgacttgttaattgtcac atcaacattcaccgtgaccttaggggaaacagaacagactccaaacatcttgaattacaatctggtcaactcagcattat gtctcctggaagagtcagcctaaatctgtcaggagtaatgttaacgcccatggatgatgtagatgtcttgttggagaata tacccatgttgcccgagcttcatagtctgaatttaactaagactggactacctggcgagagatacattgcaatcatcagg gcaatgcgatctaccaacatccaagagcttattctgaatgaaaaccgcctgtctaatattggtccgttggggttgatcaa catacctcagcttcacaagcttgatcttgatgattgtaagcttggagatgatggtcttcaaaggatcttatctgattttg aggccattccaaatctgatggaggtcagtatctctgccaatgggattaccaataatggactcctgtacctctatagcgca ttgaagcactgtaagaaaatcagagctctcaggatccatgagaacaagctacaagacggatgtggaatgcttatatcagc aattatacaagatcaaacttatcttgaaatcttgaatctctctgagctgcagttcagtacgactgatatttgtcaaatcg ctaaagctcttcaggacaagaatgttaccaaaatcaacttcaggaagtgtaatctatcactagagtcttccgagagaatc ttcaagtcaacgatggactgtaaatacctacagcatctagatgtcagttactgtacaatcgggctcaaacagtcagaaga cagagaagatgaagctgttcccatgattacagatgatgaccagcctgatgctggcgagtccttcctgcgtatgctaaatg ccagcaaagtctgggactatcttagtctgtggaactgcgagttaagcaacagcttgatcttcaaggcaccggaacggctt tactgcttaaatgaactcagccatctttgtttgcaacagaatactttgaatgatgagcacgcagcgtgcattggtatatg ccttgttaattcatggcacaacttacgtcatcttaatctaaggaagaacagcatcaccgatggaggtgccttgttgttgc taacggggattaggaagagcgtatatctgaaggaactcttcctggacatgaacaaaataaaaacatctgataccatagag gctctaacagatatcgttggtgttttgccacacctgatagagcttgatttgtcgtacaatatggatccaggctctcatca gcggatggagtcagaaatgcagagggttggaatggaagtcacacaaggcgaggggtactttgagtactacagagataaaa caaagataattgtgtga |
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Protein
| Protein ID | pfu_aug1.0_8881.1_45953.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8881.1_45953.t1 QIRVVITARTAHTENGPVCLDGHNCGETDQPTVDMPHGELKPGTELWKTLESRIIAKELIDYVKAFTFEEEYELRYKIEG GGNLVATRALLMKLLKKNHGLDKLIEALSETDLGLQDLAEKLKEFRQMQQEMNEQEGAVPNTGADDVIDGGLPIDEQLNR SAKPYWEGLSVKDHAKHVLITNINKMMEKAVEEGNFPQFEKLSERLELVIKNCDNGSIIITLNIGSIESLDTLQSLYEGG VLSNVIHKDLLTDAKMKFLRENSGKDLQNIEFGVHINPFDFQYCRMNLMKNKVVTLPNSSVESVAVFKLGSTGMTKEKYD EFRSSVTPSLRRSMEDVFVQERMTRVYDLLEHGDVGAFTLSYLELLYNELFEFINNHTCKGPLQDIGNLMSRAVRFSGAL VNGYFQFELTPASPRESGICLSALSGGDRVLMPSDLWNQLLEEKVLAERRENVFTFSSILLQDFLMMPISKQRSESGIVL TDFSQADTTTVEHSLQNNFFHLFTNFLYQFFTNTSSMSSMEFTVRDIFHLPLQDTSKDQIFELVVLATTAAKLKNLPRAS LNSLMTSICLHLFPSGDVKFLSEEFSILKKQALRAFLSFSNLPGFIESIEVHKGISWQKGNSSVSFSDVPVSDLTEVMTL LHTGSCLGSVEVTLHTGDEGRLVNCHINIHRDLRGNRTDSKHLELQSGQLSIMSPGRVSLNLSGVMLTPMDDVDVLLENI PMLPELHSLNLTKTGLPGERYIAIIRAMRSTNIQELILNENRLSNIGPLGLINIPQLHKLDLDDCKLGDDGLQRILSDFE AIPNLMEVSISANGITNNGLLYLYSALKHCKKIRALRIHENKLQDGCGMLISAIIQDQTYLEILNLSELQFSTTDICQIA KALQDKNVTKINFRKCNLSLESSERIFKSTMDCKYLQHLDVSYCTIGLKQSEDREDEAVPMITDDDQPDAGESFLRMLNA SKVWDYLSLWNCELSNSLIFKAPERLYCLNELSHLCLQQNTLNDEHAACIGICLVNSWHNLRHLNLRKNSITDGGALLLL TGIRKSVYLKELFLDMNKIKTSDTIEALTDIVGVLPHLIELDLSYNMDPGSHQRMESEMQRVGMEVTQGEGYFEYYRDKT KIIV |
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