Gene
| Gene Model ID | pfu_aug1.0_8887.1_02664 |
|---|---|
| Locus | scaffold8887.1 : 20659 ... 53975 : - |
| To GenomeBrowser | scaffold8887.1:20659..53975 |
| Genes list of scaffold | scaffold8887.1 |
| Synonym | pfu_aug2.0_12.1_06719 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | C1q domain containing protein |
| Description | Best hit to MgC1q83. 87 bits, 8e-15 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8887.1_02664.t1 | 1 | 1 | C1q | 283 | 409 | 4.3e-21 | 75.2 | 9.3e-25 | 6.9e-21 | 74.5 |
Transcript
| Transcript ID | pfu_aug1.0_8887.1_02664.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8887.1_02664.t1 atgtacgagcccgacactcccattttgaagttgtctaaaaggttgaaaggattcatcaatctgaagaccaaagacctcaa agccattgctttcaaactagaacaagttttgtatggaatattgtcatttgaatgtcttctttccgtgttcattgcgttct ttcttttcatcattaaagaacagataaatttgcagcatggaccagacatgcacgttttggatactaaaccctcgtcagtg atccttaatccaaacaatctaatatggccaaagagtgtgaaagttatgtccaaaaatgtaccgaaagacgtagcagggat cctgagcaacagctgtggagcgagatacttagttcttgttgattattatggacgaggcacaaatgagttaaagacgatcc tgacgataatctcaacaacactcacaattgagcaccacattgagcatcgacggacccctagcaagagcaagctagagatg ggaccagaacaattggaagaaaaacatgacacagaaattgcgaacctcaagaaatcccttcaagaagagagaatctttaa cagaaagcttgccgatagatgcacacgcttagaagaagaaatcaaaagtgccagatatggagaaaccgacctagacaaaa tagaagcaatacataaaggccacgttacggtttggctaaaacatcgtatctacatgaggccaggggaacaaatatctcct ccatacgggttcatagctctttccgtatcagtttcatcttccttgcacacgaaaatgttagaggaacttcgaaagcgact tctgcttaacgacaaaacgacttctgtatcacaggcaacaaaagtggcgttctacgtaagacttatgacgaataatattg cagttggggagcgcgaaacagtcaaattcaacacagtaataaccaacattggaaatggatatgacgtaaataacggaatc tttttttgtccaatcagtggcatttatttattcgccgcatcaattgcatcacaaaacgggtccgataagaatcttgatgc agagatcgtgcaccaagggagcgcagtcgctcatctacacgcaaccattcatggaattgacatgtcgtcacaagttgtag ttctacattgtctacaaggagagaaagtgtggatacgacatgtcgaaggggcgggagactcaaagacctttacaggcgat tacagcggattcacgggagtattaatttcctcgcattaa |
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Protein
| Protein ID | pfu_aug1.0_8887.1_02664.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8887.1_02664.t1 MYEPDTPILKLSKRLKGFINLKTKDLKAIAFKLEQVLYGILSFECLLSVFIAFFLFIIKEQINLQHGPDMHVLDTKPSSV ILNPNNLIWPKSVKVMSKNVPKDVAGILSNSCGARYLVLVDYYGRGTNELKTILTIISTTLTIEHHIEHRRTPSKSKLEM GPEQLEEKHDTEIANLKKSLQEERIFNRKLADRCTRLEEEIKSARYGETDLDKIEAIHKGHVTVWLKHRIYMRPGEQISP PYGFIALSVSVSSSLHTKMLEELRKRLLLNDKTTSVSQATKVAFYVRLMTNNIAVGERETVKFNTVITNIGNGYDVNNGI FFCPISGIYLFAASIASQNGSDKNLDAEIVHQGSAVAHLHATIHGIDMSSQVVVLHCLQGEKVWIRHVEGAGDSKTFTGD YSGFTGVLISSH |
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