Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_88910.1_20703
Locus scaffold88910.1 : 56 ... 1756 : +
To GenomeBrowser scaffold88910.1:56..1756
Genes list of scaffold scaffold88910.1
Synonym pfu_aug2.0_14.1_13391

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_88910.1_20703.t1 1 1 An_peroxidase 15 390 0.0 402.6 0.0 0.0 402.3

Transcript
Transcript IDpfu_aug1.0_88910.1_20703.t1
Definition-
>pfu_aug1.0_88910.1_20703.t1
atgtgcaacacaggaagcacatctgttttctataaaacttttacaaagagggagcagataaatgctgttacggcatttat
tgacggtagttctatttatggtagtagtgattttgaatctcagagacttcgagaatttactaatggaagaggtctgatga
gggaaggtgttctgacacagggtggtaagaggttattaccatttgataccggtaatttcctacatcactttgactgtcag
ttagatcccagtaagcgacatgtgccgtgtttccgtgccggtgataacagagtaaacgagcagctagccctcacagccat
gcacacactgtggatgagacagcacaaccacattgctacagaattgttaggaatcaatcctcactgggacggtaacatgc
tattccatgagacaaggaaaataattggtgccctgatgcagcatattacatatacacagtggctgccacacattcttggc
ccctcaggcatgcagctacttggggaatacaagggatataaccctactgtagacccatcaattagcaacgaatttgctac
tgccgctatgagatttggacattctttggtacagccaattattttccgattaaacgagagtttgcagccaatcccagaag
gcaatctgcctctacacaaagctttcttctccccatataagatattagaggagggcggaatagatccgttgttgagagga
ctgtacggaatgtcagccaagaagaggatgccagacgaggtcatgaactctgaactaacggagaaattattttcattagc
taatgtcgtgggtcaggatttggcatcactgaatattcaaagaggacgagaccatggtttaccattctataaccagtatc
gagtgctatgtaatctgaccagggcctccacatttgatgatttcagaagggagatgcctgatcaggctgtcagagataaa
cttctggctctatacggtcatccagaaaggtcaattatcatgcatgaactgtccagtaatgagagttttatttcgaaaaa
agataacgtagatttgtttgtgggcggtatggcagagcagccgttaccagggggtaaggttggacctacattcctgtgta
tattggtggatcagttcagacgactcagggatggtgataggtacatatgtaaactaaactag

Protein
Protein IDpfu_aug1.0_88910.1_20703.t1
Definition-
>pfu_aug1.0_88910.1_20703.t1
MCNTGSTSVFYKTFTKREQINAVTAFIDGSSIYGSSDFESQRLREFTNGRGLMREGVLTQGGKRLLPFDTGNFLHHFDCQ
LDPSKRHVPCFRAGDNRVNEQLALTAMHTLWMRQHNHIATELLGINPHWDGNMLFHETRKIIGALMQHITYTQWLPHILG
PSGMQLLGEYKGYNPTVDPSISNEFATAAMRFGHSLVQPIIFRLNESLQPIPEGNLPLHKAFFSPYKILEEGGIDPLLRG
LYGMSAKKRMPDEVMNSELTEKLFSLANVVGQDLASLNIQRGRDHGLPFYNQYRVLCNLTRASTFDDFRREMPDQAVRDK
LLALYGHPERSIIMHELSSNESFISKKDNVDLFVGGMAEQPLPGGKVGPTFLCILVDQFRRLRDGDRYICKLN

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495