Gene
| Gene Model ID | pfu_aug1.0_8897.1_53252 |
|---|---|
| Locus | scaffold8897.1 : 16396 ... 29074 : + |
| To GenomeBrowser | scaffold8897.1:16396..29074 |
| Genes list of scaffold | scaffold8897.1 |
| Synonym | pfu_aug2.0_3082.1_09058 |
Manual annotation
| Study field | signal molecules |
|---|---|
| Gene name | Wnt4 |
| Description | Best hits to platynereis, zebrafish, and wallaby Wnt4 genes. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8897.1_53252.t1 | 1 | 1 | wnt | 46 | 357 | 0.0 | 405.5 | 0.0 | 0.0 | 405.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8897.1_53252.t1 | gi|343958022|emb|CAD37166.2| | Wnt4 protein [Platynereis dumerilii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| 8-16cell | 2 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8897.1_53252.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8897.1_53252.t1 atgaatcgttttgacgttttatctgctttaataggagtttttgtgattttacagtttacagattttgcagatagtattcg ctggttgtctttggccaaaatgtccagcgtatctacgatagaaactccacaaacttgtgattccttagtgggactcgtca aaagacagaagaaaatatgtaagaagaatttagaagttatgcacagtgtgaaattaggcgctcttaacgccatagaagaa tgctcattccagtttaaaaatagaagatggaactgcagtacggtggaggctagaactatttttggaaatgtactcaaatt aggaacaagagaggcgtcatttgtacacgcaatttccgctgccggtgttgcgcacgcagtgacaagagcgtgttcgagcg gcaaacttacaaagtgtggctgtgataggactattcgcggacccagtaaagacgggttcgagtggtccgggtgttcggac aatatagcatatgggactgctttttctaaagcttttgtcgatgccagagacagaagaagaagtagaaacaataaaaatgc tggtagaaaattaatgaatttacataacaacgaagcaggtcgaaaggccatagaagacaatatgaaagtagactgtaaat gtcacggtgtttccggaagttgtgagttaaggacatgttggcgggcaatgccgagattccgggaggtcggcgttattatc aaagaaaagtttgatggcgcgacggaagtgaaactagaaaagacaaaatccataccgaggctagttccggttaacccaca gtttaagcctcatactaaatctgacttagtttatatggtggcctcaccagatttctgtgaacctgacgaaaagacaggat ccaagggaacgaaaggccgtgtatgtaacaagacatctaaagctatagatggctgtgacttaatgtgctgtggtcggggg tacgaaacccggcgtaaaaaggtcgtggacaggtgtttctgtaaatttcattggtgttgctatgtcacatgccaggaatg tgaaagagaaatcgaggaacacacttgcaaataa |
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Protein
| Protein ID | pfu_aug1.0_8897.1_53252.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8897.1_53252.t1 MNRFDVLSALIGVFVILQFTDFADSIRWLSLAKMSSVSTIETPQTCDSLVGLVKRQKKICKKNLEVMHSVKLGALNAIEE CSFQFKNRRWNCSTVEARTIFGNVLKLGTREASFVHAISAAGVAHAVTRACSSGKLTKCGCDRTIRGPSKDGFEWSGCSD NIAYGTAFSKAFVDARDRRRSRNNKNAGRKLMNLHNNEAGRKAIEDNMKVDCKCHGVSGSCELRTCWRAMPRFREVGVII KEKFDGATEVKLEKTKSIPRLVPVNPQFKPHTKSDLVYMVASPDFCEPDEKTGSKGTKGRVCNKTSKAIDGCDLMCCGRG YETRRKKVVDRCFCKFHWCCYVTCQECEREIEEHTCK |
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