Gene
| Gene Model ID | pfu_aug1.0_89.1_57964 |
|---|---|
| Locus | scaffold89.1 : 33576 ... 54805 : + |
| To GenomeBrowser | scaffold89.1:33576..54805 |
| Genes list of scaffold | scaffold89.1 |
| Synonym | pfu_aug2.0_618.1_27592 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_89.1_57964.t1 | 1 | 1 | Thioredoxin | 18 | 51 | 1.2e-06 | 28.1 | 3.1e-10 | 2.3e-06 | 27.2 |
| pfu_aug1.0_89.1_57964.t1 | 1 | 1 | PITH | 52 | 195 | 2.10195e-43 | 147.6 | 0.0 | 2.70451e-43 | 147.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_89.1_57964.t1 | gi|156542825|ref|XP_001608075.1| | PREDICTED: thioredoxin-like protein 1 isoform X1 [Nasonia vitripennis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_89.1_57964.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_89.1_57964.t1 atgagaattcacatcggaacggttgtaaacctcggaatgaataacattccgaagtgtggaccatgtcacaggattgctcc tttctttggacaactcagtctgaaatatacaagtgttgttttcctgaaagtggatgttgaccaatgtcaaatggatttgt catcgttcatcaataaggctggatgtgaatgtttgaacgagtctgatgaacacacgttctcacatgggctaactacaaag ggaggttacctggaatcagactgtgatgaacagcttttaatgagtttagaatttacacagcagatgaagttacattcatt aaagttatacgctcctgaagagaatggaccaaagacagtaaaaatcttccagaatttacctcgagcattagactttgatc aggcagagagtatggaacctgtacagacactcgaattaactcccgcagatctgaaggagggcactctaatatctctacga tacgtcaaattccaaaatgttagaaatgttactatatttgtgaaaaataatcagagtggaacagataatcccacacagat agattacattggttttgtaggcacaccggtagatacaacaaatatgtcagacttcaaaagggtagcaggaaagaaaggag aaagtcattaa |
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Protein
| Protein ID | pfu_aug1.0_89.1_57964.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_89.1_57964.t1 MRIHIGTVVNLGMNNIPKCGPCHRIAPFFGQLSLKYTSVVFLKVDVDQCQMDLSSFINKAGCECLNESDEHTFSHGLTTK GGYLESDCDEQLLMSLEFTQQMKLHSLKLYAPEENGPKTVKIFQNLPRALDFDQAESMEPVQTLELTPADLKEGTLISLR YVKFQNVRNVTIFVKNNQSGTDNPTQIDYIGFVGTPVDTTNMSDFKRVAGKKGESH |
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