Gene
| Gene Model ID | pfu_aug1.0_89.1_57967 |
|---|---|
| Locus | scaffold89.1 : 84285 ... 102705 : - |
| To GenomeBrowser | scaffold89.1:84285..102705 |
| Genes list of scaffold | scaffold89.1 |
| Synonym | pfu_aug2.0_618.1_27594 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_89.1_57967.t1 | gi|353678138|sp|P86947.1|VRP_PINMA | Valine-rich protein [Pinctada maxima] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 7 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 2 |
| adductorMuscle | 1 |
| mantle | 29 |
| mantleEdge | 4 |
| mantlePallium | 4 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_89.1_57967.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_89.1_57967.t1 atgcaggcggttctgtttgtcgttgcccttttttgttcatacctgaaacttttttattttaattacaaaaatgtaagatg tcagcaatctctaaagcttacttatattttctgtttttcttctacaacaggggccgccttcgcagttcccccaaaagaga tccaccttcctgcacctaaagtgaagacgacagtaaaggaagctcaccaagaacacgcagtaaatgttgtgcagcacgtc cccattgtaaagaatgttgtgaggactgtcaagaagatagtacctgttgtccaagaagtccccattcacattcaccgtga cttaattttgaaatctcccgtgaaagtaccgaaggtcattgacattaaaaagactatactacagccccacatacgtcacg tgccggtcgacaagccatacctggttcacagaaaggttcccgtttttcaccatcagattagaaggatacctgaacctcga ccaagaattgtcaaaatcccaagaatcgtgcccattactaaagtcttaaacagaatcattgaggtaccacatattgttaa caaagttagaagaaagaaggttattagaccagtaccagttgtgcgcacccatgtaagaaaagtccacgtgcccgttaaga tgagagttgtcgttcccgaaccagttatccagactcggcatacacagtccgtagaaactgtgggtgtgccccaaactgtt gtcagaaaagttaaaattccaaaaacttatgtccttaaggatttggtacccgttcccgaaaaagctgcgggaactgtttc ccgagtagctagtgtagttaaccggggaccagacagagcgagagctgatgctgccgcaagagcagttattgcatcaaatg ccaatatacgggctaccgtcactgtcggtcaaccaggcccagttctacccggtccaggccctggcggtgccggtttggcc gctagcgtcgcagccggtggtgccggtggtgccgctgttatgggaggtggtgccatcgttggaggtggtcctataggtgt tggcggtccattaggggatgatggtcctttacccggtgccacaggaacatttttagaagagagtaggacgcgggcatcat taatccgcagactgagtgaatcgatgattgacatgaaaataactgcatgcatttacattatgcccatggtaaattctaaa ggaaatggcctgtacagacctttgggggatcattgtgcagtacatccggggatttggagccaatccggtttagatacaac ttttacatatgtagatataatataa |
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Protein
| Protein ID | pfu_aug1.0_89.1_57967.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_89.1_57967.t1 MQAVLFVVALFCSYLKLFYFNYKNVRCQQSLKLTYIFCFSSTTGAAFAVPPKEIHLPAPKVKTTVKEAHQEHAVNVVQHV PIVKNVVRTVKKIVPVVQEVPIHIHRDLILKSPVKVPKVIDIKKTILQPHIRHVPVDKPYLVHRKVPVFHHQIRRIPEPR PRIVKIPRIVPITKVLNRIIEVPHIVNKVRRKKVIRPVPVVRTHVRKVHVPVKMRVVVPEPVIQTRHTQSVETVGVPQTV VRKVKIPKTYVLKDLVPVPEKAAGTVSRVASVVNRGPDRARADAAARAVIASNANIRATVTVGQPGPVLPGPGPGGAGLA ASVAAGGAGGAAVMGGGAIVGGGPIGVGGPLGDDGPLPGATGTFLEESRTRASLIRRLSESMIDMKITACIYIMPMVNSK GNGLYRPLGDHCAVHPGIWSQSGLDTTFTYVDII |
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