Gene
| Gene Model ID | pfu_aug1.0_892.1_51110 |
|---|---|
| Locus | scaffold892.1 : 1 ... 20322 : + |
| To GenomeBrowser | scaffold892.1:1..20322 |
| Genes list of scaffold | scaffold892.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_892.1_51110.t1 | 1 | 1 | 7tm_2 | 353 | 586 | 8.0e-07 | 28.3 | 1.8e-10 | 1.3e-06 | 27.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_892.1_51110.t1 | gi|156387677|ref|XP_001634329.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_892.1_51110.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_892.1_51110.t1 atacccgaggaacgagacagttttataataactctagtaaatgcaaatccagactcacaattgatagaaacaggtcggac agcagtagtaacggtcgaacaaagtgatcatgtcaggggaatgttccagtttgtagaagactcaaggattgtgattgttg gtgattcagaaacctctgtacggcttgctgtacgaagagaaaaaggtcaacattatcgtgttggagtcagttatgaaaca ttgcagatgacaagtcaggtccagttttatggagtaagcatcagtccagcacttgatcaggaggacttcctgcgatccgg ggatactctgatctttgaagaaaatgaagcggagatgaaatttatagatgtaagactgactccacggttagcgtccaata atccaataccaaagcagttcttcgtgacactcaagaatccaaccaacggatctgagcttcactcggacgtcagtttccat cgagctgtgatacgtattgtatacgaccgaaacaaggaactctggaatgccattaagaacgtagatgatgcatcattcag ctctgactacaatatactcaggcgggcagattcatttactgttccaagtaaattacagattaaagttccaggaaatactg actgtcaggatttctttgtcattgagtatacaagtgaacagtggtttactaaagaacccacactgttgagcaataagatt ttggcgtttgagatcaagggaggtcaatctggatatacgacatcaccagcaaaattcaagatccataccccttacggaca aaggccttctgcaaaagctcaaattttagctgtgtttgatggtcttgcaaatgacattttggatgaaacaaatattgagc ttattcaaaatatactggacgacatccttaacaaaggactgaatagaccgcgggcagattcatttactgttccaagtaaa ttacagattaaagttccaggaaataccgacttagggatggctataaccgttgtggcccaccattttgctgctgctgtcag tgcgacattcactgccaaccttctcatgcactactgttttgcttgctgtgctacccagctatgttacttggtggcagcgt attccagtccttctgaaatcctggtgtttaatactgacgaggacaattatcgctgtatcattatgggtctcttcatgcac tacttctttctctgccagtttacatggattctggctgagacgtttaacattaatccaactttggcgaataaagagaacga acaatttgaaatggtcatttttcaagaatacaaaaactatgaacaacggctatactatactttgactattacagcatcac ccattgtggttttggctatattctatgtggtgacgtataacctgtatgaacatgtatacaacatgcctgctgactttata tatggggatataaacagcagaggggaaatgtgtttcattaccaatccgtactcggccttaggaggtgtaattgtccccgt gctgatggtattactggtgataggtgttatatttgtcaaggctttccagattactcctcagtggcaagcctatgatgaca tctatagaggacgatataatatcaatgaaattcggacgttattatcgttttgggccgtaatgatatttacatggctatgg ggaggtcttcatatggcgtacgcccaaacatggatgcttatcatatttagcattttcaatattcttcagggtattttagc agttgtactgtacacactattaagaaatccgtgtttacagcagtgcttcggcaagcagcgtgatgcatactatatgtcaa atataggtttgtttgagaatggtcagtccccccagccaagcatggaggacattcacagtcagaataattccagaatatct gtctcacaaaaatgggatggagactctacattttcatcaaagtaccctaccataaacgtaaaaagggcgcttcctgcatc tggaaatatctatgtctcgccctcaattttagtgcagtcatctaaatggaacgacggcgatgaagactttaatgacctgc tatacgcattgaaggacaaaccatattttccagaaaatgacgtaattagtttagattctgataaaatgtcagacttgtcc aatacaattaacaaatttgagatgaggaggatatctatagccgatacccatctctag |
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Protein
| Protein ID | pfu_aug1.0_892.1_51110.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_892.1_51110.t1 IPEERDSFIITLVNANPDSQLIETGRTAVVTVEQSDHVRGMFQFVEDSRIVIVGDSETSVRLAVRREKGQHYRVGVSYET LQMTSQVQFYGVSISPALDQEDFLRSGDTLIFEENEAEMKFIDVRLTPRLASNNPIPKQFFVTLKNPTNGSELHSDVSFH RAVIRIVYDRNKELWNAIKNVDDASFSSDYNILRRADSFTVPSKLQIKVPGNTDCQDFFVIEYTSEQWFTKEPTLLSNKI LAFEIKGGQSGYTTSPAKFKIHTPYGQRPSAKAQILAVFDGLANDILDETNIELIQNILDDILNKGLNRPRADSFTVPSK LQIKVPGNTDLGMAITVVAHHFAAAVSATFTANLLMHYCFACCATQLCYLVAAYSSPSEILVFNTDEDNYRCIIMGLFMH YFFLCQFTWILAETFNINPTLANKENEQFEMVIFQEYKNYEQRLYYTLTITASPIVVLAIFYVVTYNLYEHVYNMPADFI YGDINSRGEMCFITNPYSALGGVIVPVLMVLLVIGVIFVKAFQITPQWQAYDDIYRGRYNINEIRTLLSFWAVMIFTWLW GGLHMAYAQTWMLIIFSIFNILQGILAVVLYTLLRNPCLQQCFGKQRDAYYMSNIGLFENGQSPQPSMEDIHSQNNSRIS VSQKWDGDSTFSSKYPTINVKRALPASGNIYVSPSILVQSSKWNDGDEDFNDLLYALKDKPYFPENDVISLDSDKMSDLS NTINKFEMRRISIADTHL |
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