Gene
| Gene Model ID | pfu_aug1.0_892.1_51116 |
|---|---|
| Locus | scaffold892.1 : 123896 ... 130339 : + |
| To GenomeBrowser | scaffold892.1:123896..130339 |
| Genes list of scaffold | scaffold892.1 |
| Synonym | pfu_aug2.0_63.1_10205 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_892.1_51116.t1 | 2 | 1 | Glycohydro_20b2 | 1 | 118 | 8.5e-26 | 91.1 | 8.4e-29 | 6.2e-25 | 88.3 |
| pfu_aug1.0_892.1_51116.t1 | 1 | 1 | Glyco_hydro_20 | 140 | 198 | 1.6e-20 | 73.6 | 2.9e-24 | 2.1e-20 | 73.1 |
| pfu_aug1.0_892.1_51116.t1 | 2 | 2 | Glycohydro_20b2 | 163 | 209 | 8.5e-26 | 91.1 | 0.087 | 650.0 | 0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_892.1_51116.t1 | gi|72098985|ref|XP_799340.1| | PREDICTED: beta-hexosaminidase subunit alpha isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_892.1_51116.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_892.1_51116.t1 atgccgcaaaaatatagcgtgacaacaaagacatacgatattgatagtaataacttccagttcactgcatcaggacaaac ttgtgacattctaactaaagcctttgcacgttacaagaccatcatatttagcccacaagataccaagctccggttctacc caaatagattcaaccgtgtcgaggagggtgtgactggactcaatgttaaagtgcaaaaaccttgtgaagaatatcccttt ttgggaatggatgaatcatatgaattgatggtaccagacagtagtggtcaggccactctatcatcagtcagtgtgtgggg tgccctgagaggactggaaacatttagtcagctgatcaccggtacaccaggaaatgggtacaaaataaacggtacaacaa taagtgacagtccccgtttccagcacagaggactcctgtttgatactagcaggcatttcttgggaactgatgttcttaaa aagaacttggatgccatggcgcagagcaagtttaacgtcttccactggcacatcgtggatgatcagtcctttccgtatgt tagccaagcctttccacagatgagccaaatggtaaagcattttacatacatacaaaaacatgtaaagttacgaaagctga ttttaaaattcgactag |
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Protein
| Protein ID | pfu_aug1.0_892.1_51116.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_892.1_51116.t1 MPQKYSVTTKTYDIDSNNFQFTASGQTCDILTKAFARYKTIIFSPQDTKLRFYPNRFNRVEEGVTGLNVKVQKPCEEYPF LGMDESYELMVPDSSGQATLSSVSVWGALRGLETFSQLITGTPGNGYKINGTTISDSPRFQHRGLLFDTSRHFLGTDVLK KNLDAMAQSKFNVFHWHIVDDQSFPYVSQAFPQMSQMVKHFTYIQKHVKLRKLILKFD |
|