Gene
| Gene Model ID | pfu_aug1.0_8920.1_67948 |
|---|---|
| Locus | scaffold8920.1 : 24 ... 12145 : + |
| To GenomeBrowser | scaffold8920.1:24..12145 |
| Genes list of scaffold | scaffold8920.1 |
| Synonym | pfu_aug2.0_607.1_24216 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8920.1_67948.t1 | 1 | 1 | AAA_33 | 67 | 153 | 2.8e-11 | 43.4 | 2.8e-14 | 5.9e-11 | 42.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8920.1_67948.t1 | gi|348529452|ref|XP_003452227.1| | PREDICTED: NEDD4-binding protein 2-like isoform X1 [Oreochromis niloticus] | 5.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_8920.1_67948.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8920.1_67948.t1 atgccacccagaccgccttttcccggatttcatgatcatggccctagaggtccctatgcttccatggtattaagacctgg acagatgctgccacctaggagggccatgccccgccctcctgcagagaaaggtttaacaggaagctcctctgtggagatag agagagtcaaagagaaaatcaatagtgggaaaaagtgccttattatactgcgtggactgccaggcagtggaaaatctact cttgccagggatttagaggccggaggatgcaccctgaccactgatgacttcttcatgaaggatgggcagtataattatga tgtcactaagctatcacaagggcatgagtggaacaagaaaagagcctccatggcgatggaggagggattcacaccagtca ttatagacaacacaaatactcaagcttgggaaatgaaaccatatgttgtcttggagagtgaaatagacagcatggtaaat gacctgatcaaggatcagataggcacctcctttgataagaattttgattacacaaaagcaacagaagaattgaaagcatt ccttcatattatgccaatcgagcctgataatcttccagtagctgaggcagtgatcgataaaaaaatgaacgaaatagtta aatcattgtccattactacagcaaagaatgatgaaagtgctagtactgatgatagcactaaaaatgaaggtaataaaaaa gaagcagtgttggaaaattcttggcagtcatctgacttcaagtcagaaacacagtccacggacgatgggagtgaagatgc tgggatcaggaaaaaggtttcacaaaaaacttctgaaaataaaagtacttgtagcattggttcagatcttgaccttgaga aaatagaagattcggctatcttaaatgacctggataatatgagttccgtttcaggagaaatggagaagttatctttggca gctcagatgtttgagaagacagtacgtcagggggaggtatcacaggcgtggtctcaagtaaggtcagatatcggctccag ccaggcagtctcactggcagacatcatggaggaacaggaagatactgagcggaaaatgaaagaattgcaaatggacgtag ttgctagcggtacacgggacatgcttgcttcaaaaatgaaagtaaagaagctaagtgaggaattcccaggaatagacgag tcggttatctatgacatctttcaggctaattgtttttcatacgaggataccagcagtgccttacgtagttgtcttgatgc agattaccgccctctgaaaactttcagcaccaaaagctcggcagccaaggagtatgagacaaatatgatagaagcagcaa agcagcagagtttgtctgaaatgcgctatcgggttaaagtcgtgtctcaatctcctgcatcgcagcgctatcgggttaaa gtcgtgtctcaatctcctgcattcgcctctcaatcgcctgtgtcttttatcgtggcacattcgtgtcgcattcttctcta ttcttatcacactcgcctaactatcgtagcggacgtgtag |
|
Protein
| Protein ID | pfu_aug1.0_8920.1_67948.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8920.1_67948.t1 MPPRPPFPGFHDHGPRGPYASMVLRPGQMLPPRRAMPRPPAEKGLTGSSSVEIERVKEKINSGKKCLIILRGLPGSGKST LARDLEAGGCTLTTDDFFMKDGQYNYDVTKLSQGHEWNKKRASMAMEEGFTPVIIDNTNTQAWEMKPYVVLESEIDSMVN DLIKDQIGTSFDKNFDYTKATEELKAFLHIMPIEPDNLPVAEAVIDKKMNEIVKSLSITTAKNDESASTDDSTKNEGNKK EAVLENSWQSSDFKSETQSTDDGSEDAGIRKKVSQKTSENKSTCSIGSDLDLEKIEDSAILNDLDNMSSVSGEMEKLSLA AQMFEKTVRQGEVSQAWSQVRSDIGSSQAVSLADIMEEQEDTERKMKELQMDVVASGTRDMLASKMKVKKLSEEFPGIDE SVIYDIFQANCFSYEDTSSALRSCLDADYRPLKTFSTKSSAAKEYETNMIEAAKQQSLSEMRYRVKVVSQSPASQRYRVK VVSQSPAFASQSPVSFIVAHSCRILLYSYHTRLTIVADV |
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