Gene
| Gene Model ID | pfu_aug1.0_8923.1_31677 |
|---|---|
| Locus | scaffold8923.1 : 3899 ... 7015 : - |
| To GenomeBrowser | scaffold8923.1:3899..7015 |
| Genes list of scaffold | scaffold8923.1 |
| Synonym | pfu_aug2.0_645.1_17681 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8923.1_31677.t1 | 1 | 1 | PTS_2-RNA | 17 | 97 | 9.0e-13 | 47.9 | 1.2e-15 | 2.3e-12 | 46.5 |
| pfu_aug1.0_8923.1_31677.t1 | 3 | 1 | LRR_4 | 166 | 175 | 1.7e-07 | 30.6 | 0.23 | 440.0 | 0.6 |
| pfu_aug1.0_8923.1_31677.t1 | 5 | 1 | LRR_6 | 167 | 179 | 2.1e-08 | 33.3 | 0.26 | 470.0 | 1.4 |
| pfu_aug1.0_8923.1_31677.t1 | 5 | 2 | LRR_6 | 190 | 207 | 2.1e-08 | 33.3 | 0.073 | 140.0 | 3.0 |
| pfu_aug1.0_8923.1_31677.t1 | 3 | 2 | LRR_4 | 191 | 228 | 1.7e-07 | 30.6 | 1.1e-06 | 0.002 | 17.7 |
| pfu_aug1.0_8923.1_31677.t1 | 5 | 3 | LRR_6 | 217 | 239 | 2.1e-08 | 33.3 | 0.00021 | 0.39 | 10.9 |
| pfu_aug1.0_8923.1_31677.t1 | 5 | 4 | LRR_6 | 245 | 253 | 2.1e-08 | 33.3 | 0.41 | 750.0 | 0.7 |
| pfu_aug1.0_8923.1_31677.t1 | 3 | 3 | LRR_4 | 245 | 283 | 1.7e-07 | 30.6 | 4.5e-05 | 0.084 | 12.5 |
| pfu_aug1.0_8923.1_31677.t1 | 5 | 5 | LRR_6 | 269 | 288 | 2.1e-08 | 33.3 | 0.00034 | 0.63 | 10.2 |
Transcript
| Transcript ID | pfu_aug1.0_8923.1_31677.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8923.1_31677.t1 atgcctacaagtgaaagtaagagtgtgaatgataacggtgtaaagccggaggaggaggacagtaggctgtcaaagaggtt atgttacgtgttacgttatggtgctgtcaaagagggactggaggttctagagggaggttttgttgacattaagaagttaa tggagctccacataatgaggcataactcagaggaggaggtattagaggaggtgaataaatccatatcacacagaggtgct aaacgcttcgaaataaaaactgaaaaagacaaaacattggtcagggcagcattttgtaggaatttcgaaacaaacccgtg tcatgaggggtcgggtgtgttcaccttggtagaatcttgtctggaatacgtgtctacaaacttggaccagtatgacctag aagactttcctgatgaacatttaataagtaaaatgatccataagttgaagaggaagaagaaattaaacaacactgcttta agacagttattagtgcctgtgttagaacacttagatttagaaggaatgtatgtaacgcagggaacaataaaaactgtgta tcagtgctgtccccagctcagggtactcagccttaaagactgtggttatatagtaacagacacatcaatggaacagatac tcaagagactgaagaatttggaatctctgaatttgtgtgcatgtaaacatgtgacagacagaactatcaaggctttgata agacatactgtgaatttaaagcagctcaatctgagctggatccatagtatatcagaggcagctcttatagagctcatcac cagctgtcctaacctttcccatctagatatatacgatcataagattagtccgcaaggtatagaaactatgacggagatag cccagcaaacaaagttaactatcgtattaaaagggctaacagacaaggacgtggcacctgaaaacccttgcttaatgtta cctaattttggcaaagtatggtga |
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Protein
| Protein ID | pfu_aug1.0_8923.1_31677.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8923.1_31677.t1 MPTSESKSVNDNGVKPEEEDSRLSKRLCYVLRYGAVKEGLEVLEGGFVDIKKLMELHIMRHNSEEEVLEEVNKSISHRGA KRFEIKTEKDKTLVRAAFCRNFETNPCHEGSGVFTLVESCLEYVSTNLDQYDLEDFPDEHLISKMIHKLKRKKKLNNTAL RQLLVPVLEHLDLEGMYVTQGTIKTVYQCCPQLRVLSLKDCGYIVTDTSMEQILKRLKNLESLNLCACKHVTDRTIKALI RHTVNLKQLNLSWIHSISEAALIELITSCPNLSHLDIYDHKISPQGIETMTEIAQQTKLTIVLKGLTDKDVAPENPCLML PNFGKVW |
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