Gene
| Gene Model ID | pfu_aug1.0_8927.1_02672 |
|---|---|
| Locus | scaffold8927.1 : 1 ... 6946 : + |
| To GenomeBrowser | scaffold8927.1:1..6946 |
| Genes list of scaffold | scaffold8927.1 |
| Synonym | pfu_aug2.0_834.1_14596 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8927.1_02672.t1 | 1 | 1 | Proteasome_A_N | 5 | 27 | 6.3e-13 | 47.7 | 1.5e-16 | 1.1e-12 | 46.9 |
| pfu_aug1.0_8927.1_02672.t1 | 1 | 1 | Proteasome | 28 | 137 | 4.2e-34 | 117.4 | 7.2e-38 | 5.3e-34 | 117.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8927.1_02672.t1 | gi|72033379|ref|XP_789764.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 2 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 2 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8927.1_02672.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8927.1_02672.t1 ttcaggaaccagtatgacaatgatgttacagtgtggagtccacaggggaggatccatcagattgagtacgccatggaggc ggtaaagcaaggatcggcaaccgtaggactcaaatcgaaaacacatgcaattctagtggctctaaagagagccccgtctg aactctcagcacatcaaaagaagataattcctatcgatgaccatataggtgtatctatagcaggattgacagctgatgct agattattaagtaactttatgagatctgagtgcctgaattcccgttatgcctacgacagacctttacctgtgtcaaggct tgtaaccacagttggtaacaaatcccagattcccacccagaggtatggcaggagaccatttggtgttggcttattagtgg caggatatgacatcagcgtccatgtgaatgttctgaaggaattttcctcatacttggatgatgaagaaagttatacgggt agcaaatttggttga |
|
Protein
| Protein ID | pfu_aug1.0_8927.1_02672.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8927.1_02672.t1 FRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAILVALKRAPSELSAHQKKIIPIDDHIGVSIAGLTADA RLLSNFMRSECLNSRYAYDRPLPVSRLVTTVGNKSQIPTQRYGRRPFGVGLLVAGYDISVHVNVLKEFSSYLDDEESYTG SKFG |
|