Gene
| Gene Model ID | pfu_aug1.0_89285.1_56763 |
|---|---|
| Locus | scaffold89285.1 : 426 ... 1918 : + |
| To GenomeBrowser | scaffold89285.1:426..1918 |
| Genes list of scaffold | scaffold89285.1 |
| Synonym | pfu_aug2.0_663.1_11059 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | MSI31 |
| Description | dbj|D86074.1|Pinctada fucata mRNA for insoluble proteinencoding C-terminal 312 amino acid residues. |
| mRNA evidence |
| Study field | Biomineralization |
|---|---|
| Gene name | MSI31, shematrin-2 |
| Description | @731-1042ntGenBank: D86073.1 (1326nt)Protein: MSI31Reference: Sudo et al., Nature 387, 563-564 (1997)@733-1044ntGenBank: AB244420.1 (1326nt)Protein: shematrin-2Reference: Yano et al., Comp. Biochem. Physiol. B, Biochem. Mol. Biol. 144, 254-262 (2006) |
| mRNA evidence |
| Study field | Biomineralization |
|---|---|
| Gene name | shematrin-2 |
| Description | reciprocal BLASTN hit to NCBI Accession AB244420 |
| mRNA evidence |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_89285.1_56763.t1 | gi|2204079|dbj|BAA20465.1| | glycine-rich protein [Pinctada fucata] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_89285.1_56763.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_89285.1_56763.t1 atggtggtgctcttggaatctatggaagcggaatcggatacggaggtggatacggaggatatggactcggaggaggatat ggaatcggaggaggatacggaatcggaggaggatacggaatcggaggaggatacggaatcggaggaggatatggaatcgg aggaggatatggactcggagtcctcggtggtggatcaagtctctatggtgtatcccaatcactttacgggggacgtgctg ttctgtcaggtcaggcttcaggagctggagttcccagctttggaagcattagtttcggtggttttggagtag |
|
Protein
| Protein ID | pfu_aug1.0_89285.1_56763.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_89285.1_56763.t1 MVVLLESMEAESDTEVDTEDMDSEEDMESEEDTESEEDTESEEDTESEEDMESEEDMDSESSVVDQVSMVYPNHFTGDVL FCQVRLQELEFPALEALVSVVLE |
|