Gene
| Gene Model ID | pfu_aug1.0_896.1_58294 |
|---|---|
| Locus | scaffold896.1 : 822 ... 12365 : - |
| To GenomeBrowser | scaffold896.1:822..12365 |
| Genes list of scaffold | scaffold896.1 |
| Synonym | pfu_aug2.0_171.1_03740 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_896.1_58294.t1 | 1 | 1 | DDDD | 22 | 91 | 4.9e-26 | 90.1 | 4.0e-30 | 6.0e-26 | 89.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_896.1_58294.t1 | gi|47217027|emb|CAG01655.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 1.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_896.1_58294.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_896.1_58294.t1 atggcttccaaggtatcccttctcgtatctgggcttcgttctacgatttttcgagggaataatgctcaaaacagtcgcag cataattcaaaaaagaacttttgtttgcaaggaaagtggagccatcttgccccaacccgaaaaaactagttttggtctgg tgaaagttgcagcaactgtcgtgccctttttatacataggaatcatggcaggaaaagagggtgcagccttcctagaagat aatgaaatattcgttcctgacgatgatgacgactaa |
|
Protein
| Protein ID | pfu_aug1.0_896.1_58294.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_896.1_58294.t1 MASKVSLLVSGLRSTIFRGNNAQNSRSIIQKRTFVCKESGAILPQPEKTSFGLVKVAATVVPFLYIGIMAGKEGAAFLED NEIFVPDDDDD |
|