Gene
| Gene Model ID | pfu_aug1.0_9.1_43395 |
|---|---|
| Locus | scaffold9.1 : 127381 ... 142865 : - |
| To GenomeBrowser | scaffold9.1:127381..142865 |
| Genes list of scaffold | scaffold9.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9.1_43395.t1 | 4 | 1 | Spectrin | 5 | 70 | 3.9e-14 | 52.7 | 2.0e-09 | 1.0e-05 | 25.7 |
| pfu_aug1.0_9.1_43395.t1 | 4 | 2 | Spectrin | 74 | 120 | 3.9e-14 | 52.7 | 0.0064 | 32.0 | 4.8 |
| pfu_aug1.0_9.1_43395.t1 | 4 | 3 | Spectrin | 173 | 221 | 3.9e-14 | 52.7 | 0.00027 | 1.3 | 9.2 |
| pfu_aug1.0_9.1_43395.t1 | 4 | 4 | Spectrin | 226 | 269 | 3.9e-14 | 52.7 | 2.2e-07 | 0.0011 | 19.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9.1_43395.t1 | gi|260807633|ref|XP_002598613.1| | hypothetical protein BRAFLDRAFT_67008 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_9.1_43395.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9.1_43395.t1 atggcagtagagttagagtctgagcatgctcagttcgccaatagtgctgtgaatgtttatgtaaatataacaagaatcat tgcaatggctcagcgactgtgtgatgctggacattacgcgtccaatacgataaggatgcaggcaggacagcttgagagag aatggaaaagtctggctgcagcagttgaggatcgtagtgtcgtgctagaaatgtctgtcaacttctacaaaaaggctgaa cagtacttggcccaggttgttggatggagacaggcttgcgaggattctcacattccctcggaaatcgagaatctagaggg cgctttacagcagcatcaaagtctcattgaagccatcacacatgcttatgctgaggtgtgtagtgatgggaaaacactac ttgatactcttcagacaccggtgacatctagtagtgtcaacagtattacagccaaggcagactactctgaagcatcagga catgtactggatgtcgtacatgataacactattaccaatgccgataagttattggctgcagcagacgagctagcgcagac aggcgagtgtgatcctaacgagatttatcgagaggcccaggagctacagagcagaatgagtaacttccttacatcgttaa atcggagaaaagacacattggaaatggctgtattcttctatacacatgtacatgagctaacaacatggcttgaggagtta caacaggaactacagagctcagagattgccgacacggtggagggggcagagcaattactggaacagttcaatcaacagcg acaggcaaccaatgaggcgtgcataaacactgttagtgagggagaaaacatactagaggaactcagaatttgtgaaaact tggtcctgtcttttgcagaggaaaattcaccctcagattttcctcgcctcaaggaagataacccttattttaatgcaata attaattctacaagatttttaatcattgatattgaatcctcgtctgaatttaatattcgaccgatatttgaaaggtcaca cttgtcgaagtttatgtga |
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Protein
| Protein ID | pfu_aug1.0_9.1_43395.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9.1_43395.t1 MAVELESEHAQFANSAVNVYVNITRIIAMAQRLCDAGHYASNTIRMQAGQLEREWKSLAAAVEDRSVVLEMSVNFYKKAE QYLAQVVGWRQACEDSHIPSEIENLEGALQQHQSLIEAITHAYAEVCSDGKTLLDTLQTPVTSSSVNSITAKADYSEASG HVLDVVHDNTITNADKLLAAADELAQTGECDPNEIYREAQELQSRMSNFLTSLNRRKDTLEMAVFFYTHVHELTTWLEEL QQELQSSEIADTVEGAEQLLEQFNQQRQATNEACINTVSEGENILEELRICENLVLSFAEENSPSDFPRLKEDNPYFNAI INSTRFLIIDIESSSEFNIRPIFERSHLSKFM |
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