Gene
| Gene Model ID | pfu_aug1.0_9.1_43414 |
|---|---|
| Locus | scaffold9.1 : 519248 ... 566012 : + |
| To GenomeBrowser | scaffold9.1:519248..566012 |
| Genes list of scaffold | scaffold9.1 |
| Synonym | pfu_aug2.0_443.1_10783 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9.1_43414.t1 | 1 | 1 | Thioredoxin | 48 | 143 | 3.0e-10 | 39.6 | 2.1e-13 | 7.8e-10 | 38.3 |
| pfu_aug1.0_9.1_43414.t1 | 3 | 1 | NDK | 204 | 342 | 0.0 | 395.1 | 6.2e-38 | 2.3e-34 | 118.0 |
| pfu_aug1.0_9.1_43414.t1 | 3 | 2 | NDK | 355 | 488 | 0.0 | 395.1 | 7.39886e-43 | 2.7e-39 | 134.0 |
| pfu_aug1.0_9.1_43414.t1 | 3 | 3 | NDK | 490 | 623 | 0.0 | 395.1 | 5.60519e-45 | 2.09999e-41 | 140.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9.1_43414.t1 | gi|115976322|ref|XP_001181827.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 11 |
| egg-Dshape | 2 |
| >Adult tissues | |
| Dshape | 4 |
| maleGonad | 2 |
| mantle | 2 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9.1_43414.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9.1_43414.t1 atgagtttgttcactatgggtgatgataatgagaaatcattgatggactaccagcctggtcttcaacagcagggaaagaa tagaaagaagagaaaagggatggcgagaaggaagggagaaatacagctccagcaggagatagagactcaggaagaatggg aggatatgctctcaaaggaggggctatatgtactagatatttaccagggatggtgcggcccttgtcaatcaatggtttcc tatttcaaaaaagccaagaatgaacttggcgatgatcttttgaaattttgcatcgccaaagcagacaatattgatgcctt ggagaaatacagaggtcactgtgaaccatgcttcttgttttttgcgggtggcatattggtagcggcaataaggggagcta actcacctaaaattctacggaccatcacagaacaactagcacaggaacacaaagttatggatggtcagtctgagagaaaa gaaatcaaagatccatatattgctcagttagaatcagaggaaaaagtggatgaggaagaagataaggaagaagaagaaga cttggaagaaccaggtcgcaagtcaaaattagcagaagccggaaagaaggagtttacagtggcacttatcaagccagacg ctgtccaggcaggaaaagtggacgaaatcttggctgacatccaggctaagggaatacaggtgcttaagcatgaggagaga acgctgacagaagacgaagttaaaacgttctattctcatttacaagaagaggctttcttccccgattttgttcagtttat ggccagtggccctagtcatattttagtcctcacaaagggacctacaggagaaaacatcatcaacgaattccgagacctaa tcggcccaacttccgtggaggaggctaaagaaacacagccagagagtttacgagccaagcacggagagaaggatttcatg aatgccttacacggcagcagttcggaggatatggctatgaaagagctggctttcttcttcccagactttgttataccaga gagagagggtaaacctaaaatacagagaacattggctctcatcagaccagatgccttcaaattacacaaagaagagattt tacagaaaattaacgattccggttttgaagttgcgatgcagaaagaactccaccttacaaaggaaatggcagaggacttc tataaggaacatcaaggacaggagtactttgatgagctcacaactagaatgtcaagtggtccagtgctagcccttgccct ggctcgggaggatgcagtagagggatggaggacgatgttaggtcctaaagagttagaggaagctaaagaaaatgatccag atagtttacgtgccaaatttgccgtagagggaacaataataaatcaactccacggttcagattcagaggaatcagcaaaa aaagaattagaaatgtttttccctatgcagcaaacggtagcagtcatcaaaccagacgcttttggcacaaaggatgagat catagacaagattcacgacgctggtttcaggatagcggcacgtaaagaaacgacactttcacgagaagtcgcggaagaat tttactcagatcacaaagataaagattactatcaggatctggtcgagcatatgacaagtggtccaacaatgtttatggtg ctatcacgagaagatgccgtagaaggctggaggtcgattataggtcctaccgacccagataaggccaaagaagaaaaccc aaactcattacgagctgcctatggacagagcgttttacaaaatgctattcacggcagttcaaatccagaacatgcccagg aatctatcaaaagaatatttgaagaagaaaaagaacaagcaacgggacaacagcaagaggaggcaggagaaggttcagag caaagagatggggaggaaggtcctcagcagcaacttgaggaaggagctcaaaatgaggaaggtcaaatagctcaaaatga ggaatctcaaaaagaggaatctaatgtacccgaatctgagaatccagacacagagcaaaaagaagcagcaaaagaggaac agaaaacagaagagacgcccgctgaaccttcaggaggtgcagaaacgcagcaacaagaacaagagtccaaaccagaagaa aaaccagaagagaaacaagaaacacaagaagaagctaaagaagaatcaaagagtgaggaggctaagtctgatgaggccca acaagagcaaaaagcacctaccccagcaccagaggaacaaaaagaagctgaagaagaaaagaaagaagaagaagctaaac cagcagaagaagagaaaaatgaagaagcagaggagccaaagcaagaagaacagaaaactgaggaggagcagaaaccttct gaagaggagcagaaaccatcagaggagcaaaaaccatcagaggagggaggagaaaccaaacaggaggaggagaaaaagga ggaagagaaacctgctgaaggctaa |
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Protein
| Protein ID | pfu_aug1.0_9.1_43414.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9.1_43414.t1 MSLFTMGDDNEKSLMDYQPGLQQQGKNRKKRKGMARRKGEIQLQQEIETQEEWEDMLSKEGLYVLDIYQGWCGPCQSMVS YFKKAKNELGDDLLKFCIAKADNIDALEKYRGHCEPCFLFFAGGILVAAIRGANSPKILRTITEQLAQEHKVMDGQSERK EIKDPYIAQLESEEKVDEEEDKEEEEDLEEPGRKSKLAEAGKKEFTVALIKPDAVQAGKVDEILADIQAKGIQVLKHEER TLTEDEVKTFYSHLQEEAFFPDFVQFMASGPSHILVLTKGPTGENIINEFRDLIGPTSVEEAKETQPESLRAKHGEKDFM NALHGSSSEDMAMKELAFFFPDFVIPEREGKPKIQRTLALIRPDAFKLHKEEILQKINDSGFEVAMQKELHLTKEMAEDF YKEHQGQEYFDELTTRMSSGPVLALALAREDAVEGWRTMLGPKELEEAKENDPDSLRAKFAVEGTIINQLHGSDSEESAK KELEMFFPMQQTVAVIKPDAFGTKDEIIDKIHDAGFRIAARKETTLSREVAEEFYSDHKDKDYYQDLVEHMTSGPTMFMV LSREDAVEGWRSIIGPTDPDKAKEENPNSLRAAYGQSVLQNAIHGSSNPEHAQESIKRIFEEEKEQATGQQQEEAGEGSE QRDGEEGPQQQLEEGAQNEEGQIAQNEESQKEESNVPESENPDTEQKEAAKEEQKTEETPAEPSGGAETQQQEQESKPEE KPEEKQETQEEAKEESKSEEAKSDEAQQEQKAPTPAPEEQKEAEEEKKEEEAKPAEEEKNEEAEEPKQEEQKTEEEQKPS EEEQKPSEEQKPSEEGGETKQEEEKKEEEKPAEG |
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