Gene
| Gene Model ID | pfu_aug1.0_9005.1_02689 |
|---|---|
| Locus | scaffold9005.1 : 8116 ... 17457 : + |
| To GenomeBrowser | scaffold9005.1:8116..17457 |
| Genes list of scaffold | scaffold9005.1 |
| Synonym | pfu_aug2.0_1321.1_04969 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9005.1_02689.t1 | 2 | 1 | Sld5 | 20 | 109 | 2.8e-08 | 34.0 | 1.1e-11 | 1.7e-07 | 31.5 |
| pfu_aug1.0_9005.1_02689.t1 | 2 | 2 | Sld5 | 140 | 183 | 2.8e-08 | 34.0 | 0.071 | 1100.0 | -0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9005.1_02689.t1 | gi|291222911|ref|XP_002731436.1| | PREDICTED: DNA replication complex GINS protein PSF1-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_9005.1_02689.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9005.1_02689.t1 atgcttgcagaaaaagcacttgacttgatacgagagctacaccgctcgttagatggatccctccctccttataatgaaga ttcaatacgacagatactagaggagatgagagcactgtttgagcagaatcagaaagatgtgagtgctacagtggcagggg aaggagggctattctctggcgtgcagctcagacacgccgccttggaacggaacaaaagatgtctactggcttacctgtac aacagattagagcagatcaagaagatgagatgggagtttgggagtgtactgccggcagaggttaaattcaatatgtgtga acaagaggtacaatggtttgggaggtacaataaaatgttagctaattacatgcgctccattggtggggaaggtggaatgg atctcacacaggatctaaaacctcctaaaaccctctacattgaggtacgatgccttatggaccatggtgaatttgaaact caagatggtaacattgttgtcctcaagaaaaatacccagcacttcctgctaagatcggagtgtgaacatttgatcagaca aggcatccttgaacacatagtgcactga |
|
Protein
| Protein ID | pfu_aug1.0_9005.1_02689.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9005.1_02689.t1 MLAEKALDLIRELHRSLDGSLPPYNEDSIRQILEEMRALFEQNQKDVSATVAGEGGLFSGVQLRHAALERNKRCLLAYLY NRLEQIKKMRWEFGSVLPAEVKFNMCEQEVQWFGRYNKMLANYMRSIGGEGGMDLTQDLKPPKTLYIEVRCLMDHGEFET QDGNIVVLKKNTQHFLLRSECEHLIRQGILEHIVH |
|