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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_901.1_07746
Locus scaffold901.1 : 120444 ... 129195 : -
To GenomeBrowser scaffold901.1:120444..129195
Genes list of scaffold scaffold901.1
Synonym pfu_aug2.0_484.1_14211

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_901.1_07746.t1 gi|189239146|ref|XP_971664.2| 7.0e-16

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
Dshape 1

Transcript
Transcript IDpfu_aug1.0_901.1_07746.t1
Definition-
>pfu_aug1.0_901.1_07746.t1
atgacgtcactagtggataaccattcgtcgttggattacgggacgtctatgtcatatcctaatcacagagatatttgttc
actgaatattcataccaataatcatataaactacaaactgaagatctcagatgaaaacatcgaagtgaacgaaaaagata
atgacgtagatagtggttgcaacgacagtgtgacgtcaccttcaaaatcagaggaaaattctgaaaacactaaaatggaa
cagaccgaagaatctgaaaaagtcaaaatgacaaacactgaggcacctcatctactacgaggcatactccaaaataaaga
taaacttgtcggtgaaaataacaacatctcagcagagcagacgacagtcgaaaatggcagcataacatccaaagcagaac
ggcatttgatgaaaaacatcatttcgacttacgacgaagatgatgatgatgatgacgacaattctttctccggagatata
actggagagagtgactatgaaagttccggggagcaacttaacgcagacgatggcgacgataatgccgattccacagaaga
tagtaaagaagccaaacgtgcccgagtggaaaatcttctttccacgatgagaccggattcccgaaattcgacagaccaaa
atgaagtgaatactcaggaagtgaggcgacaaaaacggaaacaataccaaccaatacaacacgatccaaattggcctgaa
cattctggtccaaaatattccagatttgacgaaaagatggttcttcaagaggagttagtgagactgcaacaacagctaca
ctttatgcagaaaaggtacactgaactgcaagaggaaaaacttgacgaagggaaggcaagcaacagggaaagcacaagtg
aaaaaagcatcctagaaatacccaagtacaaagactatagaaatactacaaatagcgaaaataaaaccaaacccgtgaca
gagaagcaagaaatttcacaccaaaatccatctctgaataaactttgtttgtccgagaaaaacaaaagtaccgtcatcaa
gccgcacatttttggaactcctctgcagaaactggacctagagaacttgacaaactccatcaaaagtggcttgtctggga
tgctgaatgacgcagtggacaatattgtcggcaaattcctagaggaacgaacaaaacaggaaaaagaacaggagaaacag
cgcaaggaactagaggaggcagctagagaaatgaagcaacaaaaacaagaaaaatttgaaaagccaagagaacacgatat
cttcatgcctccaagaatatcccctatgcatcctgatatgttccggcatgaccacatcggcaacatggccagaatccttg
agaaagccagtgcctttgaaacaccccggctgccaccagaactacacagagcaccaccacatccgcttccgttcccgcta
tcattcccgtattttcctcatcagatgctgcatcctcctctgtactcctgcgcgcagtcatctctaccggaaccggaaca
aaccgaggcattaccgttagtagtgaataatggcggcggtggaactccgaagaaaaagcgaaccaaagtaacagacaccc
gactctcgccaagggcagctcgtgcgttactcggacacgaaccaattcacttgaattcagccggtgatctagagagaagc
attccttcttccttcccttctctgattccacccgtcctaccgactagcgtagcgattccaaatccttccttgcaggaatc
aaacatcatgaacttttatagagagcacactccattcagtgacgtatccaggacccattcgccgctgcatggtgaacatc
tctcacctagctccacgaactctccctctgacagcattggccacatgatgaagccagagttcctagacacggggtctgac
agctttgactgccacaacatgcctttgatatcctttttcgataagacaaatcaaagcaattgcccaggatgttttccaat
gtcttttccgtctctaatgtacccttaa

Protein
Protein IDpfu_aug1.0_901.1_07746.t1
Definition-
>pfu_aug1.0_901.1_07746.t1
MTSLVDNHSSLDYGTSMSYPNHRDICSLNIHTNNHINYKLKISDENIEVNEKDNDVDSGCNDSVTSPSKSEENSENTKME
QTEESEKVKMTNTEAPHLLRGILQNKDKLVGENNNISAEQTTVENGSITSKAERHLMKNIISTYDEDDDDDDDNSFSGDI
TGESDYESSGEQLNADDGDDNADSTEDSKEAKRARVENLLSTMRPDSRNSTDQNEVNTQEVRRQKRKQYQPIQHDPNWPE
HSGPKYSRFDEKMVLQEELVRLQQQLHFMQKRYTELQEEKLDEGKASNRESTSEKSILEIPKYKDYRNTTNSENKTKPVT
EKQEISHQNPSLNKLCLSEKNKSTVIKPHIFGTPLQKLDLENLTNSIKSGLSGMLNDAVDNIVGKFLEERTKQEKEQEKQ
RKELEEAAREMKQQKQEKFEKPREHDIFMPPRISPMHPDMFRHDHIGNMARILEKASAFETPRLPPELHRAPPHPLPFPL
SFPYFPHQMLHPPLYSCAQSSLPEPEQTEALPLVVNNGGGGTPKKKRTKVTDTRLSPRAARALLGHEPIHLNSAGDLERS
IPSSFPSLIPPVLPTSVAIPNPSLQESNIMNFYREHTPFSDVSRTHSPLHGEHLSPSSTNSPSDSIGHMMKPEFLDTGSD
SFDCHNMPLISFFDKTNQSNCPGCFPMSFPSLMYP

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