Gene
| Gene Model ID | pfu_aug1.0_9011.1_09868 |
|---|---|
| Locus | scaffold9011.1 : 16947 ... 20485 : - |
| To GenomeBrowser | scaffold9011.1:16947..20485 |
| Genes list of scaffold | scaffold9011.1 |
| Synonym | pfu_aug2.0_911.1_04685 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9011.1_09868.t1 | 1 | 1 | Neur_chan_LBD | 2 | 120 | 5.5e-24 | 84.5 | 1.1e-27 | 8.0e-24 | 83.9 |
| pfu_aug1.0_9011.1_09868.t1 | 2 | 1 | Neur_chan_memb | 133 | 255 | 1.2e-10 | 41.7 | 1.6e-14 | 1.2e-10 | 41.7 |
| pfu_aug1.0_9011.1_09868.t1 | 2 | 2 | Neur_chan_memb | 267 | 290 | 1.2e-10 | 41.7 | 0.28 | 2100.0 | -1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9011.1_09868.t1 | gi|223613|prf||0903243A | acetylcholine receptor beta | 5.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_9011.1_09868.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9011.1_09868.t1 atggtctgggaccctcaagactacaacggtacaactatggtgtctttcacggaaagagaagtttggacgccaaatatcgt gcttgcgaattccaatgatgacaacgaagctctacatttgggaaatgattggatgtacgttagatacatgcacaatggaa cagctatttggtcgcctatggcacaattcaactcttactgtaaaccgaacgtaattaagtttccatatgataaacaggaa tgtggattaaatttcgtagcatggacacacggacctcatgaaatcgctttccagtaccagtcaactaaagttaacatgga cttttaccatgaaaatggtatttggattattaatgatggcagaatagcatcttggtttgccgtaatagaagtgatgaata tcttgaatgttctggtatttattctaccccctacgtctggtgaccgtgttagttattccattacagttcttcttgcgatt tgtgtttatatgacaatagtgacggacaaaatacctaaaacatccagcccaggcgtctccttcatgtgcaccaaatgtct tgttgacatgatcatcagcagctttgttgttttgtttacaattatgggtctacgactgtaccacacagcggaagatgttg tcatatccaaacatacagctcttgttacaaaatgtattcttggtctttattgtaaggagaaaaccaggattgagaactcg gacaaagttgtggagttccaaagttctactgacgaaaaatcttttccaatgcacaccagtggcgaaggaaataatacaac aacatggaaacatgttggaaaagcgagcgatattgttttttgtattgtgtgtacttttgctttcgctatgtcagatatct tgttttttgcttatgtgcaatag |
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Protein
| Protein ID | pfu_aug1.0_9011.1_09868.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9011.1_09868.t1 MVWDPQDYNGTTMVSFTEREVWTPNIVLANSNDDNEALHLGNDWMYVRYMHNGTAIWSPMAQFNSYCKPNVIKFPYDKQE CGLNFVAWTHGPHEIAFQYQSTKVNMDFYHENGIWIINDGRIASWFAVIEVMNILNVLVFILPPTSGDRVSYSITVLLAI CVYMTIVTDKIPKTSSPGVSFMCTKCLVDMIISSFVVLFTIMGLRLYHTAEDVVISKHTALVTKCILGLYCKEKTRIENS DKVVEFQSSTDEKSFPMHTSGEGNNTTTWKHVGKASDIVFCIVCTFAFAMSDILFFAYVQ |
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