Gene
| Gene Model ID | pfu_aug1.0_9057.1_45993 |
|---|---|
| Locus | scaffold9057.1 : 7306 ... 18576 : - |
| To GenomeBrowser | scaffold9057.1:7306..18576 |
| Genes list of scaffold | scaffold9057.1 |
| Synonym | pfu_aug2.0_6660.1_02862 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9057.1_45993.t1 | 1 | 1 | Gpi16 | 25 | 340 | 0.0 | 232.0 | 0.0 | 0.0 | 231.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9057.1_45993.t1 | gi|260809504|ref|XP_002599545.1| | hypothetical protein BRAFLDRAFT_114396 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_9057.1_45993.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9057.1_45993.t1 gattcagaatgtaaatcatcagctgttgagctgaaacaaacaatgactctagtctatgaccctccaaccacaaacaggaa tgggaaacaagattggaattttcgcaacacctattccacctcattgtcatcacagtgccccttagcgagcagcagtaaaa tatttgtagacatggaatcagcaaatgttgcaccattcactttgaagcctgaaccaacaaggatagagacttttagaaga gttggagaaataaagaaatatgccgtgtatgacctgaaggaagttcttggtaaacaaggaaaaatagatctgacggccct ttacccaggtgtcatgcagttctctgatatagtcccaccacctgtgtatgctagccgctatgtgactggttatggacttg agaaaggggggataacttgtcagatccacaacactctgtctgagaacataactgtaatatacatggaaactataccgtgg ttcctacgagtttacttcaacagcctcaaagttgaaaataatggtgctacaatcaaacctttcaaaatccattacattcc tggcaaggacagatcccagccatatcagttagagttggtattcagactacgagctcagtcaaccaccaagatcagcctgt cgtttgatcgagccttccttaagtggacggagtacccgcctgatgccaatcatggattttacgtaaattctgccgttata tctacgatattacctacctcagtaaacaatacagccgtacagcagcatggatccaccatagaagatagcatgaatgacca atcagagcagctgtttctacgtctccatacagaatctctgctcgtttccttgccgacacctgacttcagcatgccgtata acgtcatatgcctggcatgtactgtagtcgccatagcgtttggatcaattcacaatctaacgactcgaagattccaggct cttgatccaagcaaacagaagaaaggcatcttatcaaaaatcaaaagtagactctttaaaagttcagattcggaaaattc caagtctgattccagtggaaaaactgaatctgaagctgacaaaagtaatcaaaaagacgatttaaaagacgataatgaag atgataaaatttctaatgatacagaaccctcttga |
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Protein
| Protein ID | pfu_aug1.0_9057.1_45993.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9057.1_45993.t1 DSECKSSAVELKQTMTLVYDPPTTNRNGKQDWNFRNTYSTSLSSQCPLASSSKIFVDMESANVAPFTLKPEPTRIETFRR VGEIKKYAVYDLKEVLGKQGKIDLTALYPGVMQFSDIVPPPVYASRYVTGYGLEKGGITCQIHNTLSENITVIYMETIPW FLRVYFNSLKVENNGATIKPFKIHYIPGKDRSQPYQLELVFRLRAQSTTKISLSFDRAFLKWTEYPPDANHGFYVNSAVI STILPTSVNNTAVQQHGSTIEDSMNDQSEQLFLRLHTESLLVSLPTPDFSMPYNVICLACTVVAIAFGSIHNLTTRRFQA LDPSKQKKGILSKIKSRLFKSSDSENSKSDSSGKTESEADKSNQKDDLKDDNEDDKISNDTEPS |
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