Gene
Gene Model ID | pfu_aug1.0_9073.1_31711 |
---|---|
Locus | scaffold9073.1 : 10875 ... 17795 : - |
To GenomeBrowser | scaffold9073.1:10875..17795 |
Genes list of scaffold | scaffold9073.1 |
Synonym | pfu_aug2.0_569.1_30925 |
Manual annotation
Study field | Reproduction |
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Gene name | C1q domain containing protein |
Description | Best hit to FR715624 (MgC1q45). 84 bits, 2e-14 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_9073.1_31711.t1 | 1 | 1 | C1q | 98 | 224 | 8.0e-25 | 87.2 | 2.9e-28 | 1.4e-24 | 86.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_9073.1_31711.t1 | gi|325504389|emb|CBX41694.1| | putative C1q domain containing protein MgC1q45 [Mytilus galloprovincialis] | 2.0e-14 |
Transcript
Transcript ID | pfu_aug1.0_9073.1_31711.t1 |
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Definition | - |
>pfu_aug1.0_9073.1_31711.t1 atgtcaaatcttcttatcggacagatagttggtatcctagccattgatcctaacggtttatgttcccagatattggacat cgactgtaataactacactcctgttgagccaaatgaggttgtctgcggcacaaataatgtagatttaccgatgacaaaca atgaatcagaactacaagtaatgaagcaggagatagccaacctgaagttgcaagtaggaaaattgacgtcaaccgttaca cagatgaaagcacagtcagccgctcatgctaatacaacgaggacgtattcgttctatgcatattccactcaaacacaata cctgggagctcaacagcctataatgttcgactacacagaaacaaatatcggaaactgttttaacatacaaacaggaagat tcaaagcaccggtacgaggactgtacttcttttccggaaacatcatggcggaaccaggtcattatttacacattgaggtc gtgaaaaatggacggcgcgtgtcaagcatctttgccggtaaaagtgcgggaacattcgataacaacaccggaaatgccgt cataaatctattattacaagctggtgacgaagtatggatccgggatcagaatgaccagaatggcgttgctgttgtcagta gaacgtatgctatgttctcaggatttctaatcagtcaaaatgtttga |
Protein
Protein ID | pfu_aug1.0_9073.1_31711.t1 |
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Definition | - |
>pfu_aug1.0_9073.1_31711.t1 MSNLLIGQIVGILAIDPNGLCSQILDIDCNNYTPVEPNEVVCGTNNVDLPMTNNESELQVMKQEIANLKLQVGKLTSTVT QMKAQSAAHANTTRTYSFYAYSTQTQYLGAQQPIMFDYTETNIGNCFNIQTGRFKAPVRGLYFFSGNIMAEPGHYLHIEV VKNGRRVSSIFAGKSAGTFDNNTGNAVINLLLQAGDEVWIRDQNDQNGVAVVSRTYAMFSGFLISQNV |