Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_91.1_65227
Locus scaffold91.1 : 6706 ... 12111 : +
To GenomeBrowser scaffold91.1:6706..12111
Genes list of scaffold scaffold91.1
Synonym pfu_aug2.0_94.1_13578

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_91.1_65227.t1 1 1 7tm_1 19 242 5.6e-11 42.0 1.3e-14 6.5e-11 41.8
pfu_aug1.0_91.1_65227.t1 1 1 7TM_GPCR_Srw 36 260 1.0e-06 28.1 7.7e-10 3.8e-06 26.2

Transcript
Transcript IDpfu_aug1.0_91.1_65227.t1
Definition-
>pfu_aug1.0_91.1_65227.t1
atgatcctctactccggtctactacgccagtggattctggccatgtaccaaattgacatcagacatagcaacccgttcat
gtgtaaagtcaacttcttctcagtttactttttcgccgatcttactggttggatcctggttgcagtcacgctagagcgag
tttttctcgtttggcatccacactcaggaaagcggtattgctcacgtgcctcggcggccgttgtttgtactatcatcgta
gttagtttggttgcttttaatggacatattctgtacggcatgggagaaaagacggtgacggagaacaacgatacagtgat
caagagatgcacacgaagagacagtcagtacgaacaatttttcttccgaacttggccttggattgacatgaccaaatact
gtatcgcccctttccttttattgctgataggaaatagccttatcatcgccaaaatattgtataaccgtcgtaaattgcgc
atgcggatcggaacggaaaccgggcccagcaaggcgactcagaagaagacgtcatcgatgacggcattgttgttcacttt
gaatgcagtgtatcttaccacttctacgccgatcagcgtctatttgctgaagtttgacggatgggcggatcccggggaca
cacacggcatggcactggctagtctgctctgggccctcagtaacatactgatgtatgccaataataccttcaattttgtt
ctatattgtttgagtggacagaatttcaggaacgaagtgaagacattattttgtaagaaaaagcaccaagttcaaggaac
aaccatgatgaccttaacagaaagagttgactga

Protein
Protein IDpfu_aug1.0_91.1_65227.t1
Definition-
>pfu_aug1.0_91.1_65227.t1
MILYSGLLRQWILAMYQIDIRHSNPFMCKVNFFSVYFFADLTGWILVAVTLERVFLVWHPHSGKRYCSRASAAVVCTIIV
VSLVAFNGHILYGMGEKTVTENNDTVIKRCTRRDSQYEQFFFRTWPWIDMTKYCIAPFLLLLIGNSLIIAKILYNRRKLR
MRIGTETGPSKATQKKTSSMTALLFTLNAVYLTTSTPISVYLLKFDGWADPGDTHGMALASLLWALSNILMYANNTFNFV
LYCLSGQNFRNEVKTLFCKKKHQVQGTTMMTLTERVD

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495