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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_91.1_65231
Locus scaffold91.1 : 110524 ... 113295 : -
To GenomeBrowser scaffold91.1:110524..113295
Genes list of scaffold scaffold91.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_91.1_65231.t1 2 1 LicD 3 41 1.3e-07 31.9 3.5e-09 5.2e-05 23.4
pfu_aug1.0_91.1_65231.t1 2 2 LicD 85 125 1.3e-07 31.9 0.0005 7.3 6.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_91.1_65231.t1 gi|156395212|ref|XP_001637005.1| predicted protein [Nematostella vectensis] 0.0

Transcript
Transcript IDpfu_aug1.0_91.1_65231.t1
Definition-
>pfu_aug1.0_91.1_65231.t1
atgatttgcgaacttcaagaagggacattgctagggacggtaaaatttggcaaagttttgccatgggaaagagatggtga
tttgacatttctgactgcgaactattctgtccttcaaaatattgtggatcctgctcgtagatctggttatagggtcactg
actcggggggattatggtgctgtgtggacaatagaacagcaggaggcacgatgcaaattcacagtgtatcatgggaagtg
caactatatggtcaacacttaatggacagtgaaatcttacgtagtaaaggaataaatcccacacaaatattatttgatgg
acaatgggtacccgctccaagaaatcctgggttacacgccagaaataggtacgggtatgacatttacgcgcatgcacaac
attggatggatcttgggaagaaagacagctggttgaaatatgaaactagaagatttactaaatgtcgtgaaaagggtcgc
catgattgtttggaccaatttaatggagatggaaacatgcagtttaagatgattgtaccttga

Protein
Protein IDpfu_aug1.0_91.1_65231.t1
Definition-
>pfu_aug1.0_91.1_65231.t1
MICELQEGTLLGTVKFGKVLPWERDGDLTFLTANYSVLQNIVDPARRSGYRVTDSGGLWCCVDNRTAGGTMQIHSVSWEV
QLYGQHLMDSEILRSKGINPTQILFDGQWVPAPRNPGLHARNRYGYDIYAHAQHWMDLGKKDSWLKYETRRFTKCREKGR
HDCLDQFNGDGNMQFKMIVP

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