Gene
| Gene Model ID | pfu_aug1.0_911.1_29473 |
|---|---|
| Locus | scaffold911.1 : 57186 ... 64203 : + |
| To GenomeBrowser | scaffold911.1:57186..64203 |
| Genes list of scaffold | scaffold911.1 |
| Synonym | pfu_aug2.0_308.1_27193 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_911.1_29473.t1 | 2 | 1 | zf-B_box | 16 | 56 | 6.2e-08 | 32.4 | 7.0e-07 | 0.0015 | 18.4 |
| pfu_aug1.0_911.1_29473.t1 | 2 | 2 | zf-B_box | 70 | 91 | 6.2e-08 | 32.4 | 5.1e-07 | 0.0011 | 18.8 |
| pfu_aug1.0_911.1_29473.t1 | 3 | 1 | Reg_prop | 154 | 167 | 9.3e-06 | 25.0 | 0.00079 | 1.7 | 8.9 |
| pfu_aug1.0_911.1_29473.t1 | 5 | 1 | NHL | 194 | 204 | 1.4e-06 | 27.9 | 0.099 | 210.0 | 2.1 |
| pfu_aug1.0_911.1_29473.t1 | 5 | 2 | NHL | 236 | 248 | 1.4e-06 | 27.9 | 0.88 | 1900.0 | -0.9 |
| pfu_aug1.0_911.1_29473.t1 | 5 | 3 | NHL | 281 | 299 | 1.4e-06 | 27.9 | 0.00064 | 1.4 | 9.0 |
| pfu_aug1.0_911.1_29473.t1 | 3 | 2 | Reg_prop | 324 | 336 | 9.3e-06 | 25.0 | 0.46 | 970.0 | 0.4 |
| pfu_aug1.0_911.1_29473.t1 | 5 | 4 | NHL | 331 | 343 | 1.4e-06 | 27.9 | 0.26 | 550.0 | 0.8 |
| pfu_aug1.0_911.1_29473.t1 | 5 | 5 | NHL | 364 | 379 | 1.4e-06 | 27.9 | 0.00045 | 0.96 | 9.5 |
| pfu_aug1.0_911.1_29473.t1 | 3 | 3 | Reg_prop | 367 | 379 | 9.3e-06 | 25.0 | 0.00088 | 1.9 | 8.8 |
Transcript
| Transcript ID | pfu_aug1.0_911.1_29473.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_911.1_29473.t1 atggctctttcaaaatcagccaaccttgcgcatgcccaaacagcggttccatgcaatgtctgtgaagacgaaactcccgg agaatactactgtatagaatgtaaacataccctctgtccgctttgtgagaaattacatagaaagttcaccaaaggtcaca atgtagtcctaaggacccaagtagatgacatagataccacaatccttacctgtactgaccatggagaccaagcctcattt ctctgtgagaaatgtaacataccagtctgtggtcntctaccggtaattgagagtaaacttcaattaccccaacctccttc tttcgtacatggaaatacaaagaagctagaagaaaatctaggtaaattgatatcttctttctcagatgtgaggtcactaa aattaacatcagcgaaaaaagtttcaaaattcaaatctccattgaaatcctattcaccgatttgcataacaaaggagggt gatatatggcttggtggaaatgaatgcagagagctggtaatggtggacatcgacggaaatgtgctcaggaggagaaagat acaaaacagacctaaatacttggcagtgatggattgcggtgacgtcattataagtcctcagggcgatgattctagctcag tcaacagacttttagcaaatggaagtgaacagcacgtctttgacacgtccccttcgagaagtctcggtgtgaccgttaca gctgaccagagaatacttatttgtacatgtgatggaagagtaatgagtatcaatggagacggcaacaacgtacaacaggt atacaagggatctggtgaacgttctttaacacacgctgtagaaagcacaaaaggtagaatttacatatgtgagtgtagaa attctgctgttgtggttattagtaaaactggaaaagtgttatcaacaataacacaatcgatcaacggcaaagaattgatc tggccattagctttagttgaagacaagataggaaacattttactctcagatcgcgatagtcattctgtatacatcataga ccagaatttacagatgacggagttagttggaagttcacttggtattgtacatcctttgaggcttgctgttgatagcgata ataatctgtggatagcacagagaatgagaaatatccacgttgtgaagtatttggtctaa |
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Protein
| Protein ID | pfu_aug1.0_911.1_29473.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_911.1_29473.t1 MALSKSANLAHAQTAVPCNVCEDETPGEYYCIECKHTLCPLCEKLHRKFTKGHNVVLRTQVDDIDTTILTCTDHGDQASF LCEKCNIPVCGXLPVIESKLQLPQPPSFVHGNTKKLEENLGKLISSFSDVRSLKLTSAKKVSKFKSPLKSYSPICITKEG DIWLGGNECRELVMVDIDGNVLRRRKIQNRPKYLAVMDCGDVIISPQGDDSSSVNRLLANGSEQHVFDTSPSRSLGVTVT ADQRILICTCDGRVMSINGDGNNVQQVYKGSGERSLTHAVESTKGRIYICECRNSAVVVISKTGKVLSTITQSINGKELI WPLALVEDKIGNILLSDRDSHSVYIIDQNLQMTELVGSSLGIVHPLRLAVDSDNNLWIAQRMRNIHVVKYLV |
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