Gene
| Gene Model ID | pfu_aug1.0_9115.1_53284 |
|---|---|
| Locus | scaffold9115.1 : 3786 ... 25445 : + |
| To GenomeBrowser | scaffold9115.1:3786..25445 |
| Genes list of scaffold | scaffold9115.1 |
| Synonym | pfu_aug2.0_390.1_00687 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9115.1_53284.t1 | 1 | 1 | tRNA-synt_1e | 34 | 333 | 0.0 | 353.9 | 0.0 | 0.0 | 353.2 |
| pfu_aug1.0_9115.1_53284.t1 | 2 | 1 | tRNA-synt_1g | 131 | 175 | 3.4e-06 | 25.9 | 0.13 | 470.0 | -0.9 |
| pfu_aug1.0_9115.1_53284.t1 | 2 | 2 | tRNA-synt_1g | 274 | 346 | 3.4e-06 | 25.9 | 4.4e-09 | 1.6e-05 | 23.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9115.1_53284.t1 | gi|291234575|ref|XP_002737225.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9115.1_53284.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9115.1_53284.t1 atggtttgtgccttttccaagttgtgttggtattcaggatcttcttcattgtctggtatgtcagcatcagatgccgatgg agatggttttgaattgtcgacatacatttcctttgacattctacggagggttatgagggattacttcaactacgatgtat tttactgtatgaatataacagatattgatgacaaggatttgctgagttcctccagagacgtgctctgtgattggctggat aggctacatgggtcagaggtcacagacaactccatattttcaaagttaccacaattctatgaggcagactaccacaaaga catggaaaatcttaatgttctccctgcagatgtactgacaagggtcagtgaatacgtaccggagattgtggactacgtac agaaaatcatcgataatggatatgcatatgaatctcgtggctcagtgtatttcgacactgccaaatttgatgctgctccc aaccaccactacgccaagctggtaccagaggcgtacggtgacaaaaaggctctcaatgagggggaaggtgaactgagtgt atcagaagataggttagaggagaagagaagtactaatgattttgctctgtggaaagcatctaaaccaggtgaacctagct gggattcaccctggggcaaggggagaccaggttggcatattgaatgctctgtaatggcaagcagcatattgggacagtcc atggatatccattcaggaggatttgatctgcagttccctcatcatgataatgaacttgcccaagcagaggccttctatga gaatgaccattgggtgcggtacttcttacacactggacatttgaccatcgaaggctgcaagatgtccaagtccctcaaaa acttcatctccataaaagatgcactaggcaagcacaccccacgacaaattcggttcttatttttactgcatcagtggaag gacactctagattatggctcaaacagcatggaaatagccaccaagtacgagaaaatggtcaatgaattcttcttgaacgt aaaaagtctgttaaggaatacccccagtacagggatagaagctttcgagaaatggaataaggaagaagtggatctcaatg aaaggtttgcagagacaaagtctggtgtacatgaagcactctgtgataatgtaaacacaaggttagcgttacagaaatta caagacatgattgggtctacaaatatttacatgcagaggttcaaatctgtgtcagggtttgaggcaggaagaccgaatag aatgcttctacaaaatatcgcagactacattacaaaactgttcaaggtatttggtgcaatagagacctcagatgaagtag gctttccccagggtggggctaaggccacaaacacagaggaaatagtcatgccctacctagaagccttcgctgatttcagg gaaaaggtcagaaaagcatccatggaacagaaagttattcctgttttaaaactgtgtgatgaagtgagggacgaaaccct ccccaacctcggggtcagattggaggacaccggaactccacccacaatcaaacttgtcgacaaggaaactctgctgaagg aaaaggctgaaaaacaaaggggaatacccactcatgatgctgaagggaaggaattaccgaaatctgccataaagaaactg atgaagcagtatgatgctcaagataaacggcaccaaaaatatttagcgagtaaaagttaa |
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Protein
| Protein ID | pfu_aug1.0_9115.1_53284.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9115.1_53284.t1 MVCAFSKLCWYSGSSSLSGMSASDADGDGFELSTYISFDILRRVMRDYFNYDVFYCMNITDIDDKDLLSSSRDVLCDWLD RLHGSEVTDNSIFSKLPQFYEADYHKDMENLNVLPADVLTRVSEYVPEIVDYVQKIIDNGYAYESRGSVYFDTAKFDAAP NHHYAKLVPEAYGDKKALNEGEGELSVSEDRLEEKRSTNDFALWKASKPGEPSWDSPWGKGRPGWHIECSVMASSILGQS MDIHSGGFDLQFPHHDNELAQAEAFYENDHWVRYFLHTGHLTIEGCKMSKSLKNFISIKDALGKHTPRQIRFLFLLHQWK DTLDYGSNSMEIATKYEKMVNEFFLNVKSLLRNTPSTGIEAFEKWNKEEVDLNERFAETKSGVHEALCDNVNTRLALQKL QDMIGSTNIYMQRFKSVSGFEAGRPNRMLLQNIADYITKLFKVFGAIETSDEVGFPQGGAKATNTEEIVMPYLEAFADFR EKVRKASMEQKVIPVLKLCDEVRDETLPNLGVRLEDTGTPPTIKLVDKETLLKEKAEKQRGIPTHDAEGKELPKSAIKKL MKQYDAQDKRHQKYLASKS |
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