Gene
| Gene Model ID | pfu_aug1.0_912.1_65689 |
|---|---|
| Locus | scaffold912.1 : 85556 ... 89539 : + |
| To GenomeBrowser | scaffold912.1:85556..89539 |
| Genes list of scaffold | scaffold912.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_912.1_65689.t1 | 1 | 1 | AAA_23 | 2 | 87 | 4.7e-17 | 62.9 | 5.7e-20 | 4.7e-17 | 62.9 |
| pfu_aug1.0_912.1_65689.t1 | 1 | 1 | SMC_N | 3 | 86 | 2.9e-06 | 26.6 | 3.8e-09 | 3.1e-06 | 26.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_912.1_65689.t1 | gi|170284923|gb|AAI61019.1| | rad50 protein [Xenopus (Silurana) tropicalis] | 1.0e-35 |
Transcript
| Transcript ID | pfu_aug1.0_912.1_65689.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_912.1_65689.t1 atgtcagtccaggggatccgaagcttcggaccggaggacaaggacaaacaagttatgagctttttcacaccccttacact tatacttggtcctaacggaacagggaaaactactataatagaatgtttaaagtacatgaccacaggaattatgccccctg gtactaaaggtggagccttcatacatgatccaaaggttgcccatgagagagaggtcaagggacaaattaaactccaattt cgcgatgttacgaaaaacaagatggtgatccaaaggttgatgttggtgacacagaaa |
|
Protein
| Protein ID | pfu_aug1.0_912.1_65689.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_912.1_65689.t1 MSVQGIRSFGPEDKDKQVMSFFTPLTLILGPNGTGKTTIIECLKYMTTGIMPPGTKGGAFIHDPKVAHEREVKGQIKLQF RDVTKNKMVIQRLMLVTQK |
|