Gene
| Gene Model ID | pfu_aug1.0_9123.1_17429 |
|---|---|
| Locus | scaffold9123.1 : 1 ... 18012 : - |
| To GenomeBrowser | scaffold9123.1:1..18012 |
| Genes list of scaffold | scaffold9123.1 |
| Synonym | pfu_aug2.0_2170.1_02025 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9123.1_17429.t1 | 3 | 1 | Kinesin | 46 | 155 | 1.1e-35 | 122.9 | 1.5e-33 | 1.1e-29 | 103.1 |
| pfu_aug1.0_9123.1_17429.t1 | 3 | 2 | Kinesin | 150 | 180 | 1.1e-35 | 122.9 | 4.0e-09 | 2.9e-05 | 22.9 |
| pfu_aug1.0_9123.1_17429.t1 | 3 | 3 | Kinesin | 236 | 270 | 1.1e-35 | 122.9 | 0.26 | 1900.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9123.1_17429.t1 | gi|167045858|gb|ABZ10525.1| | kinesin-like protein KIF3A (predicted) [Callithrix jacchus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9123.1_17429.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9123.1_17429.t1 gcagatttcaacatctctgggcttgggaaaggtactgatcaagctaatactggtaccttgtttgagctgatactgttgtc ggaacagtttccggacgattttgaaggtttttcagtgatttcttctctgtcaaatgatggtactatatttgcgtacggac agacaggtaccgggaagacgttcaccatggagggggtacgtgccgtaccggagctcaggggcgtcattccgaattccttt gcacatatatttggctttatcgcaaaggcagagggagacgcaaggtttctagtcagagtgtcgtatttggagatctacaa tgaagaagttcgagatttattgggaaaagaccaacacgccagattagaggtcaaagagagaccagacgttggagtttacg ttaaggatctatcagcgtatgtggtatataatgctgacgatatggatcgtataatgacgatagctaacattggtcccgct gactataactacgatgaatccataagtacgctacgttatgcaaatcgtgctaaaaatatccagaataaggccaagattaa cgaggatcccaaggacgccttgttgagacagtatcaaaaagaaatagaagaactacgcaaacagctagaggaaggttctg attatgagtctggaagtgaggaggaatctgaagaagaagtaggagaggacggagtcgtgcgacgacggaaaaagaaaaag aaagagcacagaaggatatctaaggagaagatggcagagatccagttgaagatcgaccatgatcggaaaatgttagagga gaagaaagacatggcagaggaagaacggaatcaggtcaaacaagatctggaggagaaagaaatggaactcaagaaacatc aacccaaatga |
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Protein
| Protein ID | pfu_aug1.0_9123.1_17429.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9123.1_17429.t1 ADFNISGLGKGTDQANTGTLFELILLSEQFPDDFEGFSVISSLSNDGTIFAYGQTGTGKTFTMEGVRAVPELRGVIPNSF AHIFGFIAKAEGDARFLVRVSYLEIYNEEVRDLLGKDQHARLEVKERPDVGVYVKDLSAYVVYNADDMDRIMTIANIGPA DYNYDESISTLRYANRAKNIQNKAKINEDPKDALLRQYQKEIEELRKQLEEGSDYESGSEEESEEEVGEDGVVRRRKKKK KEHRRISKEKMAEIQLKIDHDRKMLEEKKDMAEEERNQVKQDLEEKEMELKKHQPK |
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