Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_9125.1_09892
Locus scaffold9125.1 : 31546 ... 48155 : -
To GenomeBrowser scaffold9125.1:31546..48155
Genes list of scaffold scaffold9125.1
Synonym pfu_aug2.0_1582.1_08456

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_9125.1_09892.t1 1 1 C1q 8 80 4.6e-09 36.3 5.9e-13 8.8e-09 35.4

Transcript
Transcript IDpfu_aug1.0_9125.1_09892.t1
Definition-
>pfu_aug1.0_9125.1_09892.t1
atgcgcaagaagcctatatatttctcagtatgtcaagatagcatcgtagaatatcacaatgataacgccgttgtccgctt
caacagaagtctggcaaacgagggatctgcatatgacccttccacatctacattcactccaccaagagatggggccttct
ttctttcatttggctataagagtgacaaagctaaatttacagaattacatctcacagtaaatggaattaatgttattcgt
ggaacagtgcctggagacacaaaatatgaaacagctgaacgaattgactgtgacacaagtagtgatgatcggttggattg
ccccagtggacagtctgcaatggtccaattacaacaacttatcaatcaggaaagccttttaaggctgactctggacaagc
aggtacaggagatgaggacacttctgtatgaactccaaggaatctatcgagatgacatcagggaccaagtgaagtccttc
acggatagatatttggtgacggacaatgcaatctttaatttgacggaaggtgtcatagaaaataattcggcaataaaaag
gcctagacctatgaaatcaatcattccactatacgagggccgttccaaaagttcgtggacacatgccttaaaaatcacat
ttgaagtcgtctgcgaatga

Protein
Protein IDpfu_aug1.0_9125.1_09892.t1
Definition-
>pfu_aug1.0_9125.1_09892.t1
MRKKPIYFSVCQDSIVEYHNDNAVVRFNRSLANEGSAYDPSTSTFTPPRDGAFFLSFGYKSDKAKFTELHLTVNGINVIR
GTVPGDTKYETAERIDCDTSSDDRLDCPSGQSAMVQLQQLINQESLLRLTLDKQVQEMRTLLYELQGIYRDDIRDQVKSF
TDRYLVTDNAIFNLTEGVIENNSAIKRPRPMKSIIPLYEGRSKSSWTHALKITFEVVCE

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495