Gene
| Gene Model ID | pfu_aug1.0_9145.1_09899 |
|---|---|
| Locus | scaffold9145.1 : 6242 ... 31115 : - |
| To GenomeBrowser | scaffold9145.1:6242..31115 |
| Genes list of scaffold | scaffold9145.1 |
| Synonym | pfu_aug2.0_1281.1_04936 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9145.1_09899.t1 | 1 | 1 | ADH_zinc_N | 31 | 82 | 4.6e-07 | 29.4 | 1.1e-10 | 8.4e-07 | 28.6 |
| pfu_aug1.0_9145.1_09899.t1 | 1 | 1 | ADH_N | 72 | 153 | 4.3e-21 | 74.7 | 8.1e-25 | 6.0e-21 | 74.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9145.1_09899.t1 | gi|237681130|ref|NP_001153710.1| | formaldehyde dehydrogenase [Tribolium castaneum] | 3.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9145.1_09899.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9145.1_09899.t1 atgggacaggttcattcccgccttgccacaagtcctacatcaaccaaacttgcatggatgattcttctgaggatgcttac tacaatgcatgcaaaacagtttggaatgacagattttgtgaatcctaagaaatatgacaaaccaatacaacaagtgctag tagaaatgacagatggtggactggactatacatttgaatgcattgggaatatagcaacaatgatgacacattcaagtatc tgtcgttcagacctgtttggtttggctaaactgtcgcctttcacactgtttcccatcgtcctaggacatgaaggaagtgg tatcgtggagagtgtaggggaaggagttgaaaaccttcagccaggcgaccacgtgataccagtatttgttccacagtgca acgaatgtcgtgcttgcaaatgcaagaaaaccaacttatgtgatgcatattcattcaccgcaaatgacggtcgaaatatg tgttatcaataa |
|
Protein
| Protein ID | pfu_aug1.0_9145.1_09899.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9145.1_09899.t1 MGQVHSRLATSPTSTKLAWMILLRMLTTMHAKQFGMTDFVNPKKYDKPIQQVLVEMTDGGLDYTFECIGNIATMMTHSSI CRSDLFGLAKLSPFTLFPIVLGHEGSGIVESVGEGVENLQPGDHVIPVFVPQCNECRACKCKKTNLCDAYSFTANDGRNM CYQ |
|