Gene
| Gene Model ID | pfu_aug1.0_9149.1_17430 |
|---|---|
| Locus | scaffold9149.1 : 1136 ... 4895 : - |
| To GenomeBrowser | scaffold9149.1:1136..4895 |
| Genes list of scaffold | scaffold9149.1 |
| Synonym | pfu_aug2.0_86.1_20204 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9149.1_17430.t1 | 2 | 1 | Kelch_4 | 22 | 39 | 1.1e-07 | 31.4 | 0.00033 | 0.62 | 9.8 |
| pfu_aug1.0_9149.1_17430.t1 | 2 | 2 | Kelch_4 | 152 | 198 | 1.1e-07 | 31.4 | 3.8e-07 | 0.00071 | 19.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9149.1_17430.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9149.1_17430.t1 atgacaacagggcccgtctactttggtggggtctttgacaatgaggatggggatgaggagttagagggacagttctacaa tgacatgtacttactggacttagaaagacacagatggttccctatctcgctcaggggaagaaaaggtgtaacagaaaaaa agaaaagaagaagaaagaaagaagaaggaggtgaagaaggagaagaaatggaggaagaagatgacgggaaggaagaaatg gaagaggacatgaaaacactagatataaatagccaggatgtagaaatgacggaagaaagtgcggaatccgcaaataacac aaacaatgaggaagcaacagacaatacgtatgatgatggaatattcaaagtttccgtgtcggcaaatagtgcagaaacga ctgatggtgacgtgacagatagggacgctagtgttagtgcgtttgtacctaaacctcgtatgggggcacagcttgtgatt aaaagtagtgttctatatttatacggcggaatgtgggaaaatggcgataagcaatatacactcaaagatttctattcatt agatctagacaaaatggatgaatggaatacaatactacaactggatgaaaaagatatgatgtgggaggactcgggatcct ctgatgaggagatggaagccgcaggaggagcagatgaagaggaggaggaagatgaagactctgaagacgatatagagaca attctagagggatgtgatgtcccagcaagactggaagaagaagaagtgactgtgtactttgaaaggacaaaagcattttg ggtcgaacagtcaaaaaaaatattttga |
|
Protein
| Protein ID | pfu_aug1.0_9149.1_17430.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9149.1_17430.t1 MTTGPVYFGGVFDNEDGDEELEGQFYNDMYLLDLERHRWFPISLRGRKGVTEKKKRRRKKEEGGEEGEEMEEEDDGKEEM EEDMKTLDINSQDVEMTEESAESANNTNNEEATDNTYDDGIFKVSVSANSAETTDGDVTDRDASVSAFVPKPRMGAQLVI KSSVLYLYGGMWENGDKQYTLKDFYSLDLDKMDEWNTILQLDEKDMMWEDSGSSDEEMEAAGGADEEEEEDEDSEDDIET ILEGCDVPARLEEEEVTVYFERTKAFWVEQSKKIF |
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