Gene
| Gene Model ID | pfu_aug1.0_915.1_43849 |
|---|---|
| Locus | scaffold915.1 : 25526 ... 52990 : + |
| To GenomeBrowser | scaffold915.1:25526..52990 |
| Genes list of scaffold | scaffold915.1 |
| Synonym | pfu_aug2.0_5944.1_16157 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_915.1_43849.t1 | 1 | 1 | Fibrinogen_C | 22 | 118 | 6.8e-17 | 61.8 | 2.5e-20 | 1.2e-16 | 61.0 |
| pfu_aug1.0_915.1_43849.t1 | 1 | 1 | PAN_1 | 138 | 175 | 2.9e-06 | 26.9 | 1.5e-09 | 7.4e-06 | 25.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_915.1_43849.t1 | gi|260814492|ref|XP_002601949.1| | hypothetical protein BRAFLDRAFT_86433 [Branchiostoma floridae] | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_915.1_43849.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_915.1_43849.t1 atgaaggaagaactcaagggcctccgccaaattgtccactattattcttttatttgcaactcagggaatgatattatcca tgacatgacctacccctctggaaaaagagcgatattcctgatggaagataaaaacgggaataaacgtttttctgaatact cgactttcattgttgcgtcggagggagaaggatataaactaacaataagcggatacgtacatcgcagtggtgccgcaggg gattctgtgcggtataatgcgaacggaaacaacttcaccactattgaccgcgaccaagacaaagccgcctggggtaactg tgctgtccattatcacgggggatggtggtatgatatctcatcttttgaatatcaaaacaggaaatctactgttctgaacg atatttttttggatgtttctttctttgattgcgtgaaagaatgtctaaatagcagaaattgtcgatctatcaactatagt caaacgttaaaattatgtgaactaagtcaattcgattctcagctgtacgtatccggagcaagtgatcgaaaggggtatgt tacgacgaatatgaataaatggaaggatgaagtcggggattgtgatcctactgaatgtgaaagagatgaaaagtgcgtgg tcagagatggattgcttacctgtgtaaaaaccgggaaaagatacttagcttctgacttcagcttcacttacagatacata gacgatgtgttgtccatcaataatcccaaattcgcggattaccctagcagaatctatccttcggagcttgaagtcaaaga aactacccagacaaataattcagcatcctatatggacataatgttgtcctatgacactgatggtcacatgaacacctcac tatatgacaaacgtgacgacttcaataacagcatcacaaccttttcttttcttagtagcaacatcccatcatcgcctgtt tatggcgtgttcatatatcaattgatacgccatgccagagcaagtaccaaatatacagattttattctgagagctaggcg tctttcagataagcttctcagtcagggatacgtttgtgacagactaacatcgtcacgaaggaagttctacggccgatatg gggaactcgtcatacactatgatgtcccacactccagaatggtagatgatattttgtcatag |
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Protein
| Protein ID | pfu_aug1.0_915.1_43849.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_915.1_43849.t1 MKEELKGLRQIVHYYSFICNSGNDIIHDMTYPSGKRAIFLMEDKNGNKRFSEYSTFIVASEGEGYKLTISGYVHRSGAAG DSVRYNANGNNFTTIDRDQDKAAWGNCAVHYHGGWWYDISSFEYQNRKSTVLNDIFLDVSFFDCVKECLNSRNCRSINYS QTLKLCELSQFDSQLYVSGASDRKGYVTTNMNKWKDEVGDCDPTECERDEKCVVRDGLLTCVKTGKRYLASDFSFTYRYI DDVLSINNPKFADYPSRIYPSELEVKETTQTNNSASYMDIMLSYDTDGHMNTSLYDKRDDFNNSITTFSFLSSNIPSSPV YGVFIYQLIRHARASTKYTDFILRARRLSDKLLSQGYVCDRLTSSRRKFYGRYGELVIHYDVPHSRMVDDILS |
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