Gene
| Gene Model ID | pfu_aug1.0_915.1_43853 |
|---|---|
| Locus | scaffold915.1 : 111533 ... 123645 : - |
| To GenomeBrowser | scaffold915.1:111533..123645 |
| Genes list of scaffold | scaffold915.1 |
| Synonym | pfu_aug2.0_906.1_21255 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_915.1_43853.t1 | 2 | 1 | GDA1_CD39 | 24 | 109 | 8.8e-27 | 93.6 | 4.1e-18 | 6.1e-14 | 51.3 |
| pfu_aug1.0_915.1_43853.t1 | 2 | 2 | GDA1_CD39 | 122 | 272 | 8.8e-27 | 93.6 | 8.7e-15 | 1.3e-10 | 40.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_915.1_43853.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_915.1_43853.t1 atgataaaactaatactcgtttttggaatcacattgtttcatgtcagtgtatcgtcacccatcaggtttcagtacggcat tatcatagatgcagggagtagcagtagtaaattacacctgtatagatggataccaaaaacggacattaaacaagtaccaa aatttgaggatgttctttacaaaaagttccgacctggtgtggcagcattttatcctaatttagaagaaatagaggaatac gttatggacatgttaagaacacttgaaaatgatgttatgccagaagaggaaatcagtaaaactcgaatttcatttcttgc cactgcagatgacaagagacctgccttaatgagaaacaaacttattaaaatctatggtgaaggaaatgccagtgagtgtg cacggattgtgaaacagtaccttaaagcagtacccgaggaacggtgttctcctaaaccctgcacaatcggcggagtatac ggacctcctattcccagcatgaatttcgttgccctagggaacatccatgccacaaccactgaactaggtgtgctgaacag aactggagagctggatcttcataccctagaatccagggcggcctacttttgtggtttgaacttgacggaagctagaaatg agttcaacgtaacagaaaggtgggcttcatcagattgtcagaatggagtatacatcccgatgcttctcagagcaatcggt ttccatgacgatgttaagatattcgccaaaaagtacatcaacaatgttaaagttggatggactcttggtgccattcttca tcatgtggagaattcctacatgacaagatgtatcgatgacaaggacatgtgctag |
|
Protein
| Protein ID | pfu_aug1.0_915.1_43853.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_915.1_43853.t1 MIKLILVFGITLFHVSVSSPIRFQYGIIIDAGSSSSKLHLYRWIPKTDIKQVPKFEDVLYKKFRPGVAAFYPNLEEIEEY VMDMLRTLENDVMPEEEISKTRISFLATADDKRPALMRNKLIKIYGEGNASECARIVKQYLKAVPEERCSPKPCTIGGVY GPPIPSMNFVALGNIHATTTELGVLNRTGELDLHTLESRAAYFCGLNLTEARNEFNVTERWASSDCQNGVYIPMLLRAIG FHDDVKIFAKKYINNVKVGWTLGAILHHVENSYMTRCIDDKDMC |
|