Gene
| Gene Model ID | pfu_aug1.0_918.1_36735 |
|---|---|
| Locus | scaffold918.1 : 23416 ... 30777 : + |
| To GenomeBrowser | scaffold918.1:23416..30777 |
| Genes list of scaffold | scaffold918.1 |
| Synonym | pfu_aug2.0_44.1_13474 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_918.1_36735.t1 | 2 | 1 | RRM_1 | 1 | 12 | 4.8e-10 | 38.9 | 0.38 | 1400.0 | -1.1 |
| pfu_aug1.0_918.1_36735.t1 | 2 | 2 | RRM_1 | 49 | 88 | 4.8e-10 | 38.9 | 4.2e-13 | 1.6e-09 | 37.2 |
| pfu_aug1.0_918.1_36735.t1 | 1 | 1 | RRM_6 | 49 | 87 | 6.0e-09 | 35.7 | 2.8e-12 | 1.0e-08 | 34.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_918.1_36735.t1 | gi|321474916|gb|EFX85880.1| | hypothetical protein DAPPUDRAFT_20224, partial [Daphnia pulex] | 2.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_918.1_36735.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_918.1_36735.t1 atgaatggtcagtggttaggaagccggccaattaggaccaactgggcaaccagaaaaccccctgctcccataccaaagga aacacaaataaaacagttgtcatatgaggaggttttcagtcaatccagttctaccaactgcacagtatattgtggaggaa tagggcctaacactacagaagaaacgattcgatcagcgtttaatacatatggttcaatacaagaagtccgagtgtttaaa gacaagggatatgcctttataaggtaa |
|
Protein
| Protein ID | pfu_aug1.0_918.1_36735.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_918.1_36735.t1 MNGQWLGSRPIRTNWATRKPPAPIPKETQIKQLSYEEVFSQSSSTNCTVYCGGIGPNTTEETIRSAFNTYGSIQEVRVFK DKGYAFIR |
|