Gene
| Gene Model ID | pfu_aug1.0_9193.1_17448 |
|---|---|
| Locus | scaffold9193.1 : 1 ... 675 : - |
| To GenomeBrowser | scaffold9193.1:1..675 |
| Genes list of scaffold | scaffold9193.1 |
| Synonym | NA |
Manual annotation
| Study field | structural proteins |
|---|---|
| Gene name | actin |
| Description | Actin partial sequence. BLASTP hit to GU645246(Penaeus japonicus). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9193.1_17448.t1 | 1 | 1 | Actin | 4 | 42 | 4.7e-15 | 54.9 | 3.3e-19 | 4.9e-15 | 54.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9193.1_17448.t1 | gi|341899346|gb|EGT55281.1| | hypothetical protein CAEBREN_32825 [Caenorhabditis brenneri] | 7.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_9193.1_17448.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9193.1_17448.t1 atgtgtgacgacgaagttgctgctttagttgttgacaatggctccggaatgtgcaaggccggtttcgccggagacgatgc ccccagggctgtgttcccatccattgtcggaagacccagacatcag |
|
Protein
| Protein ID | pfu_aug1.0_9193.1_17448.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9193.1_17448.t1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ |
|