Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_9210.1_09911
Locus scaffold9210.1 : 5036 ... 13885 : -
To GenomeBrowser scaffold9210.1:5036..13885
Genes list of scaffold scaffold9210.1
Synonym pfu_aug2.0_2640.1_02207

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_9210.1_09911.t1 1 1 F5_F8_type_C 22 143 2.8e-08 33.6 1.2e-11 9.1e-08 32.0

Transcript
Transcript IDpfu_aug1.0_9210.1_09911.t1
Definition-
>pfu_aug1.0_9210.1_09911.t1
atgatttttgatggctccactggaagcatcactgattttgctttaaacaaaccaacacgtcaaagttcaaccctcaatca
tgggatctctaataaggctgtggatggtgatagaaatacgcatgcaaattcttgtacttctacaaaaaacgagagcaatc
cgtactgggaggtagatctgaaacaagaatatgacatatcaatggtggagatccttgacaagtatgatgtgaatgagaat
ggaatattaggaattgagattaaggctgccggtgaagatagaaagtttgaccaatcatgtggttctgttaatgttctccc
gacacccactgttccaggtatcaattttgtaacaacatgtaatatgcggggaagatacttgcggcttcagatcccacaag
ataacagaatactcgcggtttgtgaggtagaggtttattaa

Protein
Protein IDpfu_aug1.0_9210.1_09911.t1
Definition-
>pfu_aug1.0_9210.1_09911.t1
MIFDGSTGSITDFALNKPTRQSSTLNHGISNKAVDGDRNTHANSCTSTKNESNPYWEVDLKQEYDISMVEILDKYDVNEN
GILGIEIKAAGEDRKFDQSCGSVNVLPTPTVPGINFVTTCNMRGRYLRLQIPQDNRILAVCEVEVY

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