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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_92455.1_20772
Locus scaffold92455.1 : 1 ... 1742 : +
To GenomeBrowser scaffold92455.1:1..1742
Genes list of scaffold scaffold92455.1
Synonym pfu_aug2.0_27.1_23285

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_92455.1_20772.t1 gi|332031000|gb|EGI70626.1| TBC1 domain family member 15 [Acromyrmex echinatior] 6.0e-25

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-Dshape 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_92455.1_20772.t1
Definition-
>pfu_aug1.0_92455.1_20772.t1
gtgatatggacagatctgccgtgtaaaaacttccatcttttaatctgtcttgccatattagatactgaaaaaactacact
gatagaaaacaaatttggattcactgaaatactcaagcacatcaatgatatgacgggtgcaatacatctagaggaaacct
taaggaaagcagagggtatattcctacagctgaaacaaagtaagaagcttccagatgctctgaaggaaatcattggagtg
gaggtcacacccagtagctctacgtcaagttcaaactttgtcacccccgcgggtactccagtcaacgtagaggcagtgcc
aaaactagagaaattgactctacccaaagaaaacggacatagtaacgcaagttctggtacgggtacggcagttacgacac
ctgatgatagtagtatagaaattctggtggaaaacggagcagattcggccgtcacgaattttttcacttga

Protein
Protein IDpfu_aug1.0_92455.1_20772.t1
Definition-
>pfu_aug1.0_92455.1_20772.t1
VIWTDLPCKNFHLLICLAILDTEKTTLIENKFGFTEILKHINDMTGAIHLEETLRKAEGIFLQLKQSKKLPDALKEIIGV
EVTPSSSTSSSNFVTPAGTPVNVEAVPKLEKLTLPKENGHSNASSGTGTAVTTPDDSSIEILVENGADSAVTNFFT

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